RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 CD27P26842 260 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 MARK3P27448 753 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 GRIA3P42263 894 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 CA7P43166 264 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 CAPZA2P47755 286 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 TPMTP51580 245 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 MRPL12P52815 198 aaKnown RBP3.03□□□□□ -1.92
CSDE1-209ENST00000525132 CDH8P55286 799 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 FOXL2P58012 376 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 BPIFB3P59826 476 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 OLR1P78380 273 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 MRPS35P82673 323 aaKnown RBP3.03□□□□□ -1.92
CSDE1-209ENST00000525132 RBP5P82980 135 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 SP4Q02446 784 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 GABPAQ06546 454 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 GOLGA8DPQ0D2H9 430 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 KCNJ12Q14500 433 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 DRAP1Q14919 205 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-209ENST00000525132 NUMA1Q14980 2115 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 PSMD5Q16401 504 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 NTRK2Q16620 822 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 MMEL1Q495T6 779 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 ODF2Q5BJF6 829 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 SH2D4BQ5SQS7 431 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 SLC9A4Q6AI14 798 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 ADALQ6DHV7 355 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 TMEM154Q6P9G4 183 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 RRM2BQ7LG56 351 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 EFL1Q7Z2Z2 1120 aaKnown RBP3.03□□□□□ -1.92
CSDE1-209ENST00000525132 CEP57Q86XR8 500 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 DNAAF5Q86Y56 855 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 HSCBQ8IWL3 235 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 UNC45BQ8IWX7 931 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 CCDC170Q8IYT3 715 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 IZUMO1Q8IYV9 350 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 LRRC75A-AS1Q8N1F1 130 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 NUP93Q8N1F7 819 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 SYT2Q8N9I0 419 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-209ENST00000525132 POC5Q8NA72 575 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 ZBTB8BQ8NAP8 495 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-209ENST00000525132 POGLUT1Q8NBL1 392 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 GDAP1Q8TB36 358 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 ACTRT2Q8TDY3 377 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 OSCP1Q8WVF1 389 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 ATG4AQ8WYN0 398 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 CNOT9Q92600 299 aaKnown RBP3.03□□□□□ -1.92
CSDE1-209ENST00000525132 KCNJ9Q92806 393 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 SMARCE1Q969G3 411 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 KIAA1143Q96AT1 154 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-209ENST00000525132 VPS33AQ96AX1 596 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 KLHL29Q96CT2 875 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 KLHL15Q96M94 604 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 WDFY2Q96P53 400 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 GCNAQ96QF7 691 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 THAP7Q9BT49 309 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-209ENST00000525132 ALG8Q9BVK2 526 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 NUDT9Q9BW91 350 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 SYNDIG1Q9H7V2 258 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 KCNK9Q9NPC2 374 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 ASAH2Q9NR71 780 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 SERTAD4Q9NUC0 356 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 GIMAP4Q9NUV9 329 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 IL1RAPL1Q9NZN1 696 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 MPP6Q9NZW5 540 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 CPSF2Q9P2I0 782 aaKnown RBP3.03□□□□□ -1.92
CSDE1-209ENST00000525132 ARPP21Q9UBL0 812 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-209ENST00000525132 SH2B3Q9UQQ2 575 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 CCL26Q9Y258 94 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 UBE2J1Q9Y385 318 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-209ENST00000525132 KNSTRNQ9Y448 316 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 TDRD6O60522 2096 aaKnown RBP3.03□□□□□ -1.92
CSDE1-209ENST00000525132 NCOA6Q14686 2063 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-209ENST00000525132 KAT6AQ92794 2004 aa3.03□□□□□ -1.92
CSDE1-209ENST00000525132 CKAP5Q14008 2032 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 hCG_1809904A0A1W2PP81 198 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 A0A1W2PPE2 198 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 A0A1W2PR64 198 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 LINC00473A8K010 186 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 RTCAO00442 366 aaKnown RBP3.02□□□□□ -1.93
CSDE1-209ENST00000525132 CTDSP2O14595 271 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 PRRG1O14668 218 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 TRIAP1O43715 76 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 PEX1O43933 1283 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 SMPD2O60906 423 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 PROP1O75360 226 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 JRKO75564 520 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 OR2C1O95371 312 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 VNN1O95497 513 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 MT-ND3P03897 115 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 PDHA1P08559 390 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 IL6RP08887 468 aaPredicted RBP3.02□□□□□ -1.93
CSDE1-209ENST00000525132 HOXD4P09016 255 aaPredicted RBP3.02□□□□□ -1.93
CSDE1-209ENST00000525132 FAM200BP0CF97 657 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 TTKP33981 857 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 CPOXP36551 454 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 HNF4AP41235 474 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 CLCN2P51788 898 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 MVDP53602 400 aa3.02□□□□□ -1.93
CSDE1-209ENST00000525132 NANOS3P60323 173 aaKnown RBP3.02□□□□□ -1.93
CSDE1-209ENST00000525132 RPS6P62753 249 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms