RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 DNHD1Q96M86 4753 aa3□□□□□ -1.93
CSDE1-208ENST00000524652 CLUHO75153 1309 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 FANCMQ8IYD8 2048 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 A0A087WYN8 130 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 YJEFN3A6XGL0 299 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 C2CD4DB7Z1M9 353 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 E7ENQ6 273 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 STMND1H3BQB6 276 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 PRRG1O14668 218 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 SLC16A5O15375 505 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 LIASO43766 372 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 GRAP2O75791 330 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 SOX30O94993 753 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 LCA5LO95447 670 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 PRAMEF12O95522 483 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 OLFM2O95897 454 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 TBX18O95935 607 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 OAS1P00973 400 aaKnown RBP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 SERPING1P05155 500 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 TPM3P06753 285 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 SETSIPP0DME0 302 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 CSH1P0DML2 217 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 CSH2P0DML3 217 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 TCF4P15884 667 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 PTPN2P17706 415 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 KCNA5P22460 613 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 RRM1P23921 792 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 GABRR2P28476 465 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 AKT1P31749 480 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 ELF1P32519 619 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 GABRB2P47870 512 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 HSPA7P48741 367 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 TKTL1P51854 596 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 GSCP56915 257 aaPredicted RBP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 ERVFC1-1P60608 527 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 RPL7AP62424 266 aaKnown RBP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 POU3F1Q03052 451 aaPredicted RBP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 ZBTB16Q05516 673 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 KLHL30Q0D2K2 578 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 SMARCB1Q12824 385 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 SF3A3Q12874 501 aaKnown RBP eCLIP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 TAF10Q12962 218 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 EIF4EBP2Q13542 120 aaPredicted RBP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 TRIM14Q14142 442 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 HLTFQ14527 1009 aaKnown RBP eCLIP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 TEAD2Q15562 447 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 MAPRE1Q15691 268 aaKnown RBP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 PLK5Q496M5 336 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF569Q5MCW4 686 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 PPM1LQ5SGD2 360 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 LIN9Q5TKA1 542 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 SNX30Q5VWJ9 437 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 SYPL2Q5VXT5 272 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 NAA35Q5VZE5 725 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 TXNDC8Q6A555 127 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 PM20D1Q6GTS8 502 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 ACAD10Q6JQN1 1059 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 SPSB3Q6PJ21 355 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 MMS22LQ6ZRQ5 1243 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 TOGARAM2Q6ZUX3 1019 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 GET4Q7L5D6 327 aaPredicted RBP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF367Q7RTV3 350 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 CCDC186Q7Z3E2 898 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 BNIPLQ7Z465 357 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 ANKS1BQ7Z6G8 1248 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 DNAJB7Q7Z6W7 309 aaPredicted RBP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 TMEM110Q86TL2 294 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF329Q86UD4 541 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF677Q86XU0 584 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 GATAD2AQ86YP4 633 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 LRRC8AQ8IWT6 810 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 MCOLN2Q8IZK6 566 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 NUP93Q8N1F7 819 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 TTC39CQ8N584 583 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 EMC1Q8N766 993 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 LRRC57Q8N9N7 239 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 CMASQ8NFW8 434 aaPredicted RBP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 PJA1Q8NG27 643 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 OR8K1Q8NGG5 319 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 IPO4Q8TEX9 1081 aaKnown RBP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 FAM216AQ8WUB2 273 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 HDAC7Q8WUI4 952 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 RSC1A1Q92681 617 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 SYN2Q92777 582 aaPredicted RBP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 FGF14Q92915 247 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 RTP4Q96DX8 246 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 HES6Q96HZ4 224 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 PPP1R13BQ96KQ4 1090 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 HSFY1Q96LI6 401 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 FAM81BQ96LP2 452 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 APOLD1Q96LR9 279 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 RIPOR3Q96MK2 946 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 CYP2S1Q96SQ9 504 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 NPAS1Q99742 590 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 C11orf70Q9BRQ4 267 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 DESI2Q9BSY9 194 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 ANP32EQ9BTT0 268 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 RPP25Q9BUL9 199 aaKnown RBP2.99□□□□□ -1.93
CSDE1-208ENST00000524652 PLA2G2FQ9BZM2 168 aa2.99□□□□□ -1.93
CSDE1-208ENST00000524652 UBXN6Q9BZV1 441 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms