RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 NSMCE4AQ9NXX6 385 aa11.53□□□□□ -0.56
CLN8-207ENST00000524258 PDE10AQ9Y233 779 aa11.53□□□□□ -0.56
CLN8-207ENST00000524258 IGSF10Q6WRI0 2623 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 IGKV1-8A0A0C4DH67 115 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 TEX51A0A1B0GUA7 166 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 TERTO14746 1132 aaKnown RBP11.52□□□□□ -0.57
CLN8-207ENST00000524258 SLC16A5O15375 505 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 CATP04040 527 aaKnown RBP11.52□□□□□ -0.57
CLN8-207ENST00000524258 LIPCP11150 499 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 ZNF37AP17032 561 aaPredicted RBP11.52□□□□□ -0.57
CLN8-207ENST00000524258 PSMB5P28074 263 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 IMPA1P29218 277 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 GP5P40197 560 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 GCGRP47871 477 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 TUBB4BP68371 445 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 TUBB3Q13509 450 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 ZKSCAN8Q15776 578 aaPredicted RBP11.52□□□□□ -0.57
CLN8-207ENST00000524258 PPP1R3AQ16821 1122 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 TMEM164Q5U3C3 297 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 PRAMEF17Q5VTA0 474 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 PWWP2BQ6NUJ5 590 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 UBE2R2Q712K3 238 aaPredicted RBP11.52□□□□□ -0.57
CLN8-207ENST00000524258 C19orf47Q8N9M1 422 aaKnown RBP11.52□□□□□ -0.57
CLN8-207ENST00000524258 SLC38A9Q8NBW4 561 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 OR1L3Q8NH93 324 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 MAGEC3Q8TD91 643 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 SNRNP27Q8WVK2 155 aaKnown RBP11.52□□□□□ -0.57
CLN8-207ENST00000524258 SKA2Q8WVK7 121 aaPredicted RBP11.52□□□□□ -0.57
CLN8-207ENST00000524258 KCNE4Q8WWG9 221 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 LINGO1Q96FE5 620 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 ELMO2Q96JJ3 720 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 DCBLD2Q96PD2 775 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 FCRL4Q96PJ5 515 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 FMO2Q99518 471 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 RAB11FIP5Q9BXF6 653 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 CDC42EP4Q9H3Q1 356 aaKnown RBP11.52□□□□□ -0.57
CLN8-207ENST00000524258 AKIRIN1Q9H9L7 192 aaPredicted RBP11.52□□□□□ -0.57
CLN8-207ENST00000524258 CAB39LQ9H9S4 337 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 NFU1Q9UMS0 254 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 KLHL20Q9Y2M5 609 aa11.52□□□□□ -0.57
CLN8-207ENST00000524258 ISM1B1AKI9 464 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 STMND1H3BQB6 276 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 KLK10O43240 276 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 KDM1AO60341 852 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 NRP2O60462 931 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 STK17BO94768 372 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 FAM153BP0C7A2 387 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 RHOXF2BP0C7M4 288 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 MYBL2P10244 700 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 MAGP20916 626 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 OAS2P29728 719 aaKnown RBP11.51□□□□□ -0.57
CLN8-207ENST00000524258 STX2P32856 288 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 GMPRP36959 345 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 GRIA3P42263 894 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 RGS4P49798 205 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 PNLIPRP1P54315 467 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 IL2P60568 153 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 POU4F1Q01851 419 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 ACY1Q03154 408 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 FOXM1Q08050 763 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 SP140Q13342 867 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 PDAP1Q13442 181 aaKnown RBP11.51□□□□□ -0.57
CLN8-207ENST00000524258 NAB1Q13506 487 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 FAM153CQ494X1 144 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 GRTP1Q5TC63 336 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 LRRC8EQ6NSJ5 796 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 TTC23LQ6PF05 361 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 SBSNQ6UWP8 590 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 MBOAT1Q6ZNC8 495 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 TAX1BP1Q86VP1 789 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 BPHLQ86WA6 291 aaPredicted RBP11.51□□□□□ -0.57
CLN8-207ENST00000524258 PPM1NQ8N819 430 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 OR2L3Q8NG85 312 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 HNRNPLLQ8WVV9 542 aaKnown RBP11.51□□□□□ -0.57
CLN8-207ENST00000524258 ANKRD7Q92527 254 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 RNF31Q96EP0 1072 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 TCTN2Q96GX1 697 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 UBXN10Q96LJ8 280 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 ZNF285Q96NJ3 590 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 RHOXF2Q9BQY4 288 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 EPB41L4BQ9H329 900 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 PRORYQ9H606 182 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 ACSS3Q9H6R3 686 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 SYNPO2LQ9H987 977 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 PARVBQ9HBI1 364 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 POPDC3Q9HBV1 291 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 SYTL2Q9HCH5 934 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 PDE7BQ9NP56 450 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 STOX2Q9P2F5 926 aaPredicted RBP11.51□□□□□ -0.57
CLN8-207ENST00000524258 SLC39A10Q9ULF5 831 aa11.51□□□□□ -0.57
CLN8-207ENST00000524258 LOC101059948A0A1B0GTJ6 334 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 ESPNB1AK53 854 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 CDC7O00311 574 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 RRP8O43159 456 aaKnown RBP11.5□□□□□ -0.57
CLN8-207ENST00000524258 ZBTB14O43829 449 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 RAD1O60671 282 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 CTSVO60911 334 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 KRT37O76014 449 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 KIAA0754O94854 1291 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 FKBP9O95302 570 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms