RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 B3GNTL1Q67FW5 361 aaPredicted RBP24.83■■□□□ 1.57
PVT1-219ENST00000523427 KCTD11Q693B1 232 aa24.83■■□□□ 1.57
PVT1-219ENST00000523427 FCRL6Q6DN72 434 aa24.83■■□□□ 1.57
PVT1-219ENST00000523427 FIGLAQ6QHK4 219 aa24.83■■□□□ 1.57
PVT1-219ENST00000523427 VRK3Q8IV63 474 aa24.83■■□□□ 1.57
PVT1-219ENST00000523427 TTC29Q8NA56 475 aaPredicted RBP24.83■■□□□ 1.57
PVT1-219ENST00000523427 DENND1AQ8TEH3 1009 aa24.83■■□□□ 1.57
PVT1-219ENST00000523427 COG1Q8WTW3 980 aa24.83■■□□□ 1.57
PVT1-219ENST00000523427 SELENOSQ9BQE4 189 aa24.83■■□□□ 1.57
PVT1-219ENST00000523427 CRB3Q9BUF7 120 aa24.83■■□□□ 1.57
PVT1-219ENST00000523427 LRRC40Q9H9A6 602 aa24.83■■□□□ 1.57
PVT1-219ENST00000523427 ZNF160Q9HCG1 818 aa24.83■■□□□ 1.57
PVT1-219ENST00000523427 A0A1B0GUH1 482 aa24.82■■□□□ 1.56
PVT1-219ENST00000523427 PTMAP06454 111 aaKnown RBP24.82■■□□□ 1.56
PVT1-219ENST00000523427 CD9P21926 228 aa24.82■■□□□ 1.56
PVT1-219ENST00000523427 FOXN2P32314 431 aa24.82■■□□□ 1.56
PVT1-219ENST00000523427 PLOD1Q02809 727 aaPredicted RBP24.82■■□□□ 1.56
PVT1-219ENST00000523427 PCM1Q15154 2024 aa24.82■■□□□ 1.56
PVT1-219ENST00000523427 ZC3H12BQ5HYM0 836 aaKnown RBP24.82■■□□□ 1.56
PVT1-219ENST00000523427 PACS1Q6VY07 963 aa24.82■■□□□ 1.56
PVT1-219ENST00000523427 BCORP1Q8N888 145 aa24.82■■□□□ 1.56
PVT1-219ENST00000523427 C8orf44Q96CB5 159 aa24.82■■□□□ 1.56
PVT1-219ENST00000523427 INTS7Q9NVH2 962 aaKnown RBP24.82■■□□□ 1.56
PVT1-219ENST00000523427 PLA2G3Q9NZ20 509 aa24.82■■□□□ 1.56
PVT1-219ENST00000523427 STOX2Q9P2F5 926 aaPredicted RBP24.82■■□□□ 1.56
PVT1-219ENST00000523427 TJP3O95049 919 aa24.81■■□□□ 1.56
PVT1-219ENST00000523427 CCR7P32248 378 aa24.81■■□□□ 1.56
PVT1-219ENST00000523427 VSX2P58304 361 aaPredicted RBP24.81■■□□□ 1.56
PVT1-219ENST00000523427 ARG2P78540 354 aa24.81■■□□□ 1.56
PVT1-219ENST00000523427 MFAP5Q13361 173 aa24.81■■□□□ 1.56
PVT1-219ENST00000523427 DNAJC21Q5F1R6 531 aaKnown RBP24.81■■□□□ 1.56
PVT1-219ENST00000523427 SLC22A18Q96BI1 424 aa24.81■■□□□ 1.56
PVT1-219ENST00000523427 VPS50Q96JG6 964 aa24.81■■□□□ 1.56
PVT1-219ENST00000523427 SLX1AQ9BQ83 275 aa24.81■■□□□ 1.56
PVT1-219ENST00000523427 SLC26A1Q9H2B4 701 aa24.81■■□□□ 1.56
PVT1-219ENST00000523427 SEMA3GQ9NS98 782 aa24.81■■□□□ 1.56
PVT1-219ENST00000523427 NXT1Q9UKK6 140 aaKnown RBP24.81■■□□□ 1.56
PVT1-219ENST00000523427 SLC39A10Q9ULF5 831 aa24.81■■□□□ 1.56
PVT1-219ENST00000523427 EFR3BQ9Y2G0 817 aa24.81■■□□□ 1.56
PVT1-219ENST00000523427 NUP210LQ5VU65 1888 aa24.81■■□□□ 1.56
PVT1-219ENST00000523427 APCP25054 2843 aa24.81■■□□□ 1.56
PVT1-219ENST00000523427 IQCF5A8MTL0 148 aa24.8■■□□□ 1.56
PVT1-219ENST00000523427 F10P00742 488 aa24.8■■□□□ 1.56
PVT1-219ENST00000523427 STSP08842 583 aa24.8■■□□□ 1.56
PVT1-219ENST00000523427 CETN2P41208 172 aa24.8■■□□□ 1.56
PVT1-219ENST00000523427 SRSF11Q05519 484 aaKnown RBP24.8■■□□□ 1.56
PVT1-219ENST00000523427 SPA17Q15506 151 aa24.8■■□□□ 1.56
PVT1-219ENST00000523427 TCTE1Q5JU00 501 aa24.8■■□□□ 1.56
PVT1-219ENST00000523427 KLHDC8BQ8IXV7 354 aa24.8■■□□□ 1.56
PVT1-219ENST00000523427 LKAAEAR1Q8TD35 194 aa24.8■■□□□ 1.56
PVT1-219ENST00000523427 HDAC10Q969S8 669 aa24.8■■□□□ 1.56
PVT1-219ENST00000523427 PTGFRNQ9P2B2 879 aa24.8■■□□□ 1.56
PVT1-219ENST00000523427 MYO7BQ6PIF6 2116 aa24.8■■□□□ 1.56
PVT1-219ENST00000523427 POLQO75417 2590 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 ANKRD17O75179 2603 aaKnown RBP24.79■■□□□ 1.56
PVT1-219ENST00000523427 MROH6A6NGR9 719 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 ONECUT2O95948 504 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 S1PR4O95977 384 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 EIF2S1P05198 315 aaKnown RBP24.79■■□□□ 1.56
PVT1-219ENST00000523427 UQCRHP07919 91 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 ACPPP15309 386 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 RWDD2BP57060 319 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 KLC1Q07866 573 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 WASHC2DQ5SRD0 308 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 DCUN1D3Q8IWE4 304 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 SLC22A15Q8IZD6 547 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 DNAAF3Q8N9W5 541 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 OR52K1Q8NGK4 314 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 LMF1Q96S06 567 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 MENTQ9BUN1 341 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 RUBCNLQ9H714 662 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 LUC7LQ9NQ29 371 aaKnown RBP24.79■■□□□ 1.56
PVT1-219ENST00000523427 SLC2A6Q9UGQ3 507 aa24.79■■□□□ 1.56
PVT1-219ENST00000523427 HYKKA2RU49 373 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 MAP2K7O14733 419 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 GOT2P00505 430 aaKnown RBP24.78■■□□□ 1.56
PVT1-219ENST00000523427 RPN2P04844 631 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 SNRPB2P08579 225 aaKnown RBP24.78■■□□□ 1.56
PVT1-219ENST00000523427 GRNP28799 593 aaKnown RBP24.78■■□□□ 1.56
PVT1-219ENST00000523427 PTPN7P35236 360 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 OCA2Q04671 838 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 GRB7Q14451 532 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 FAM214AQ32MH5 1076 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 YOD1Q5VVQ6 348 aaPredicted RBP24.78■■□□□ 1.56
PVT1-219ENST00000523427 NLRP9Q7RTR0 991 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 KRT222Q8N1A0 295 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 RNF214Q8ND24 703 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 OR6P1Q8NGX9 317 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 OR2L8Q8NGY9 312 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 STT3BQ8TCJ2 826 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 MIEF2Q96C03 454 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 TTC1Q99614 292 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 ZNF304Q9HCX3 659 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 ZC3H7BQ9UGR2 993 aaKnown RBP24.78■■□□□ 1.56
PVT1-219ENST00000523427 C3orf18Q9UK00 162 aa24.78■■□□□ 1.56
PVT1-219ENST00000523427 A0A0J9YVX5 310 aa24.77■■□□□ 1.56
PVT1-219ENST00000523427 VSTM2BA6NLU5 285 aa24.77■■□□□ 1.56
PVT1-219ENST00000523427 CTSVO60911 334 aa24.77■■□□□ 1.56
PVT1-219ENST00000523427 MED26O95402 600 aa24.77■■□□□ 1.56
PVT1-219ENST00000523427 HPP00738 406 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms