RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 TRABDQ9H4I3 376 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 COG4Q9H9E3 785 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 ENAMQ9NRM1 1142 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 TAB2Q9NYJ8 693 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 ZNF282Q9UDV7 671 aaPredicted RBP13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 TEKT2Q9UIF3 430 aa13.2□□□□□ -0.3
NKX3-1-202ENST00000523261 IGLV3-12A0A075B6K2 115 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 BUD23O43709 281 aaKnown RBP13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 MED26O95402 600 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 TPOP07202 933 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 MX2P20592 715 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 MAGP20916 626 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 CXCR2P25025 360 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 EEF1DP29692 281 aaKnown RBP13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 PRLHRP49683 370 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 ARSEP51690 589 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 DLX5P56178 289 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 ZNF658BQ4V348 819 aaPredicted RBP13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 TCP11X2Q5H9J9 407 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 TMEM211Q6ICI0 200 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 CCDC70Q6NSX1 233 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 PPP1R2P3Q6NXS1 205 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 PAMR1Q6UXH9 720 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 ARHGEF18Q6ZSZ5 1173 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 CD163Q86VB7 1156 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 CDC20BQ86Y33 519 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 CCDC71Q8IV32 467 aaPredicted RBP13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 ZZZ3Q8IYH5 903 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 SPATA22Q8NHS9 363 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 FAM57AQ8TBR7 257 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 ZNF398Q8TD17 642 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 ZNF285Q96NJ3 590 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 CEP41Q9BYV8 373 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 SLC25A51Q9H1U9 297 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 ZNF304Q9HCX3 659 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 KLHL20Q9Y2M5 609 aa13.19□□□□□ -0.3
NKX3-1-202ENST00000523261 FITM1A5D6W6 292 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 IDSB3KWA1 339 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 TPBGLP0DKB5 382 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 EMP2P54851 167 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 AP2B1P63010 937 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 PPIDQ08752 370 aaKnown RBP13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 TUBA3CQ13748 450 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 DPYSL3Q14195 570 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 TCTE1Q5JU00 501 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 RNFT1Q5M7Z0 435 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 TUBA3EQ6PEY2 450 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 KDELC1Q6UW63 502 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 BEST3Q8N1M1 668 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 CPSF7Q8N684 471 aaKnown RBP13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 TTC29Q8NA56 475 aaPredicted RBP13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 OR5AR1Q8NGP9 310 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 RND1Q92730 232 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 IMMP1LQ96LU5 166 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 ZNF700Q9H0M5 742 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 ZNF395Q9H8N7 513 aaPredicted RBP13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 OR6C2Q9NZP2 312 aa13.18□□□□□ -0.3
NKX3-1-202ENST00000523261 LOC102723996A0A087X1L8 192 aa13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 ISM1B1AKI9 464 aa13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 ATE1O95260 518 aa13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 RAF1P04049 648 aa13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 ICAM2P13598 275 aa13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 EEF1GP26641 437 aaKnown RBP13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 OR1C1Q15619 314 aa13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 FAM214AQ32MH5 1076 aa13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 GALNTL5Q7Z4T8 443 aa13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 RPRMLQ8N4K4 120 aa13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 TMEM178AQ8NBL3 297 aa13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 GOT1L1Q8NHS2 421 aaPredicted RBP13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 SEC16BQ96JE7 1060 aa13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 PWWP2AQ96N64 755 aa13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 SCINQ9Y6U3 715 aa13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 PHF3Q92576 2039 aaKnown RBP13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 SCN2AQ99250 2005 aa13.17□□□□□ -0.3
NKX3-1-202ENST00000523261 A8MUI8 341 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 INAFM1C9JVW0 142 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 CD46P15529 392 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 PTGER1P34995 402 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 PTGS2P35354 604 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 CD96P40200 585 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 ST13P50502 369 aaKnown RBP13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 PTPRCAPQ14761 206 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 KIR2DS3Q14952 304 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 ACER2Q5QJU3 275 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 SPINK14Q6IE38 97 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 PRMT9Q6P2P2 845 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 CHSY3Q70JA7 882 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 PQLC3Q8N755 202 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 MYRIPQ8NFW9 859 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 COX4I2Q96KJ9 171 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 ANKRD10Q9NXR5 420 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 GNPTGQ9UJJ9 305 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 PKP3Q9Y446 797 aa13.16□□□□□ -0.3
NKX3-1-202ENST00000523261 LOC285095A0A1B0GVY8 99 aa13.15□□□□□ -0.3
NKX3-1-202ENST00000523261 RCCD1A6NED2 376 aa13.15□□□□□ -0.3
NKX3-1-202ENST00000523261 FTLP02792 175 aaPredicted RBP13.15□□□□□ -0.3
NKX3-1-202ENST00000523261 ZNF24P17028 368 aa13.15□□□□□ -0.3
NKX3-1-202ENST00000523261 GRIA3P42263 894 aa13.15□□□□□ -0.3
NKX3-1-202ENST00000523261 CHRNA4P43681 627 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms