RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 HERPUD2Q9BSE4 406 aa6.17□□□□□ -1.42
VPS13B-211ENST00000522802 CRACR2AQ9BSW2 395 aa6.17□□□□□ -1.42
VPS13B-211ENST00000522802 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-211ENST00000522802 SNX7Q9UNH6 387 aa6.17□□□□□ -1.42
VPS13B-211ENST00000522802 FARSAQ9Y285 508 aaKnown RBP6.17□□□□□ -1.42
VPS13B-211ENST00000522802 SPEF1Q9Y4P9 236 aa6.17□□□□□ -1.42
VPS13B-211ENST00000522802 KLF2Q9Y5W3 355 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-211ENST00000522802 SPTBP11277 2137 aa6.17□□□□□ -1.42
VPS13B-211ENST00000522802 IGHV5-51A0A0C4DH38 117 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 KIR2DS5A0A0G2JLQ3 304 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 A0A0G2JNG1 304 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 FAM237AA0A1B0GTK4 181 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 C19orf84I3L1E1 186 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 KIR2DS3K7RE56 304 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 SCRG1O75711 98 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 TOX4O94842 621 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 JUNP05412 331 aaKnown RBP6.16□□□□□ -1.42
VPS13B-211ENST00000522802 VSIG10L2P0DP72 767 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 AGXTP21549 392 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 CDH5P33151 784 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-211ENST00000522802 KRT9P35527 623 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 GPR1P46091 355 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 CSNK1DP48730 415 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 BPIFB4P59827 614 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 MEF2AQ02078 507 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-211ENST00000522802 TRAF2Q12933 501 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 KIR2DS5Q14953 304 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 COBLL1Q53SF7 1204 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 PRAMEF17Q5VTA0 474 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 IRGCQ6NXR0 463 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 TTI2Q6NXR4 508 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 IGFL3Q6UXB1 125 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 Q6ZS92 163 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 TMEM26Q6ZUK4 368 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 MED25Q71SY5 747 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 TECPR1Q7Z6L1 1165 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 MRGPREQ86SM8 312 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 GPR135Q8IZ08 494 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 UMODL1-AS1Q8N2C9 162 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 ANKRD53Q8N9V6 530 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 JOSD2Q8TAC2 188 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 FATE1Q969F0 183 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 SNX21Q969T3 373 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 RELTQ969Z4 430 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 C18orf8Q96DM3 657 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 COX14Q96I36 57 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 SLC41A2Q96JW4 573 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 GNRHR2Q96P88 292 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 TRAPPC9Q96Q05 1148 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 SLX1AQ9BQ83 275 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 MLPHQ9BV36 600 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-211ENST00000522802 CINPQ9BW66 212 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-211ENST00000522802 ABCG8Q9H221 673 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 RETREG1Q9H6L5 497 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 LRRC19Q9H756 370 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 PDE7BQ9NP56 450 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 AGPAT4Q9NRZ5 378 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 C5AR2Q9P296 337 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 ZNHIT2Q9UHR6 403 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 SCOCQ9UIL1 159 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 RCOR1Q9UKL0 485 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 RARRES3Q9UL19 164 aa6.16□□□□□ -1.42
VPS13B-211ENST00000522802 NCOA6Q14686 2063 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-211ENST00000522802 VPS13CQ709C8 3753 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 CCDC88CQ9P219 2028 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 KCNN4O15554 427 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 HTRA2O43464 458 aaPredicted RBP6.15□□□□□ -1.42
VPS13B-211ENST00000522802 CREB3O43889 395 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 CDC14BO60729 498 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 TMEM127O75204 238 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 PALMO75781 387 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 ALPPP05187 535 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 CAPN1P07384 714 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 LTA4HP09960 611 aaKnown RBP6.15□□□□□ -1.42
VPS13B-211ENST00000522802 MYBL2P10244 700 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 CTPS1P17812 591 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 SSTR2P30874 369 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 OTX2P32243 289 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 SNX16P57768 344 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 KCNK10P57789 538 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 FOXL2P58012 376 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 YBEYP58557 167 aaPredicted RBP6.15□□□□□ -1.42
VPS13B-211ENST00000522802 AP1S1P61966 158 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 POLR2LP62875 67 aaKnown RBP6.15□□□□□ -1.42
VPS13B-211ENST00000522802 DPTQ07507 201 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 ABRQ12979 859 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 GPR18Q14330 331 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 ZNF235Q14590 738 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 CDSNQ15517 529 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 ADRM1Q16186 407 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 ZNF630Q2M218 657 aaPredicted RBP6.15□□□□□ -1.42
VPS13B-211ENST00000522802 C19orf54Q5BKX5 351 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 TAF3Q5VWG9 929 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 LRRC66Q68CR7 880 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 ENOSF1Q7L5Y1 443 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 ADGRE4PQ86SQ3 457 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 TMEM126BQ8IUX1 230 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 ARFGAP1Q8N6T3 406 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 NPWQ8N729 165 aa6.15□□□□□ -1.42
VPS13B-211ENST00000522802 SIDT2Q8NBJ9 832 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms