RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 LENG8Q96PV6 779 aaPredicted RBP15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 MBD2Q9UBB5 411 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 DNAJB4Q9UDY4 337 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 RGS17Q9UGC6 210 aaPredicted RBP15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 OAS3Q9Y6K5 1087 aaKnown RBP15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 LMO7Q8WWI1 1683 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 FAM234BA2RU67 622 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 PRODHO43272 600 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 RGS10O43665 173 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 TGFB1P01137 390 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 EPOP01588 193 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 NR2C1P13056 603 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 IL12AP29459 219 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 PPP3R1P63098 170 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 PDSS1Q5T2R2 415 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 TNFAIP8L2Q6P589 184 aaPredicted RBP15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 ERN2Q76MJ5 926 aaKnown RBP15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 OMA1Q96E52 524 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 IDH3BO43837 385 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 VEGFDO43915 354 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 AP2A2O94973 939 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 CD2P06729 351 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 THRBP10828 461 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 MSX2P35548 267 aaPredicted RBP15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 BNIP1Q12981 228 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 TCEAL6Q6IPX3 200 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 SLC39A5Q6ZMH5 540 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 OR4E2Q8NGC2 313 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 ZNF347Q96SE7 839 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 SLC29A3Q9BZD2 475 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 WDR12Q9GZL7 423 aaKnown RBP15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 SMPD3Q9NY59 655 aaPredicted RBP15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 B4GALT6Q9UBX8 382 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 ACSL5Q9ULC5 683 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 FAM221BA6H8Z2 402 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 NADKO95544 446 aaPredicted RBP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 VWA5B1Q5TIE3 1220 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 PAOXQ6QHF9 649 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 OXR1Q8N573 874 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 SMARCD2Q92925 531 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 CLPTM1LQ96KA5 538 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 C1orf74Q96LT6 269 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 CIB1Q99828 191 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 SPATA6Q9NWH7 488 aaPredicted RBP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 IQCMA0A1B0GVH7 501 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 ZNF726A6NNF4 738 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 A8MU76 341 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 BCAP31P51572 246 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 SMG9Q9H0W8 520 aaKnown RBP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 SIX4Q9UIU6 781 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 RPL10P27635 214 aaKnown RBP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 VEGFBP49765 207 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 RPS21P63220 83 aaKnown RBP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 FAM214AQ32MH5 1076 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 GALNT5Q7Z7M9 940 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 FAR1Q8WVX9 515 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 Q9N2J8 555 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 RAB26Q9ULW5 256 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 BACE2Q9Y5Z0 518 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 DUOX1Q9NRD9 1551 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 CDC7O00311 574 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 SLC22A2O15244 555 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 COCHO43405 550 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 TCF4P15884 667 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 PAX7P23759 505 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 CXCR1P25024 350 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 RASGEF1BQ0VAM2 473 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 LACTB2Q53H82 288 aaPredicted RBP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 PERM1Q5SV97 790 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 ZNF433Q8N7K0 673 aaPredicted RBP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 MAPK15Q8TD08 544 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 KLHL6Q8WZ60 621 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 CENPNQ96H22 339 aaPredicted RBP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 NARS2Q96I59 477 aaKnown RBP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 C1QTNF1Q9BXJ1 281 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 WDR6Q9NNW5 1121 aaKnown RBP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 SAP18O00422 153 aaKnown RBP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 CXCR6O00574 342 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 FADS2O95864 444 aaKnown RBP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 RENP00797 406 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 SERPINA3P01011 423 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 PSMA1P25786 263 aaKnown RBP15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 CCINQ13939 588 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 OR4K17Q8NGC6 315 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 MCFD2Q8NI22 146 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 DSN1Q9H410 356 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 MCUBQ9NWR8 336 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 MED31Q9Y3C7 131 aa15.88■□□□□ 0.13
PCDHA3-201ENST00000522353 A8MUA0 341 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 ABLIM1O14639 778 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 GADD45GO95257 159 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 SP140Q13342 867 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 GPRC6AQ5T6X5 926 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 NAT8LQ8N9F0 302 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 TMEM125Q96AQ2 219 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 COMMD4Q9H0A8 199 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 OR5K4A6NMS3 321 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 PSMD11O00231 422 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms