RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 E7ENX8 843 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 CCNT2O60583 730 aaKnown RBP12.66□□□□□ -0.38
CPNE3-205ENST00000522240 LYPLA1O75608 230 aaPredicted RBP12.66□□□□□ -0.38
CPNE3-205ENST00000522240 WDR47O94967 919 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 FAM107AO95990 144 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 CHRNGP07510 517 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 ANXA6P08133 673 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 TROVE2P10155 538 aaKnown RBP eCLIP12.66□□□□□ -0.38
CPNE3-205ENST00000522240 EPB42P16452 691 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 EPHA8P29322 1005 aaPredicted RBP12.66□□□□□ -0.38
CPNE3-205ENST00000522240 SLC19A1P41440 591 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 RAB28P51157 221 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 SEC24CP53992 1094 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 TAP2Q03519 686 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 GTF2H2Q13888 395 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 ZXDCQ2QGD7 858 aaPredicted RBP12.66□□□□□ -0.38
CPNE3-205ENST00000522240 C18orf21Q32NC0 220 aaPredicted RBP12.66□□□□□ -0.38
CPNE3-205ENST00000522240 FBXO48Q5FWF7 155 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 CAPN13Q6MZZ7 669 aaPredicted RBP12.66□□□□□ -0.38
CPNE3-205ENST00000522240 GTF2H2CQ6P1K8 395 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 SLC9B2Q86UD5 537 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 CUZD1Q86UP6 607 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 TRIM48Q8IWZ4 208 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 LRRC56Q8IYG6 542 aaPredicted RBP12.66□□□□□ -0.38
CPNE3-205ENST00000522240 SYTL1Q8IYJ3 562 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 NAGSQ8N159 534 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 CHCHD4Q8N4Q1 142 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 AFAP1L2Q8N4X5 818 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 TEX9Q8N6V9 391 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 FAM46DQ8NEK8 389 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 OR52E1Q8NGJ3 308 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 SLC37A2Q8TED4 501 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 AGAP11Q8TF27 550 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 ZDHHC1Q8WTX9 485 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 NSUN5Q96P11 429 aaKnown RBP12.66□□□□□ -0.38
CPNE3-205ENST00000522240 SIKE1Q9BRV8 207 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 ILKAPQ9H0C8 392 aaPredicted RBP12.66□□□□□ -0.38
CPNE3-205ENST00000522240 STN1Q9H668 368 aaKnown RBP12.66□□□□□ -0.38
CPNE3-205ENST00000522240 ZBTB26Q9HCK0 441 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 CCDC177Q9NQR7 707 aaPredicted RBP12.66□□□□□ -0.38
CPNE3-205ENST00000522240 GPRC5BQ9NZH0 403 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 SLC6A14Q9UN76 642 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 TDRKHQ9Y2W6 561 aaKnown RBP12.66□□□□□ -0.38
CPNE3-205ENST00000522240 ANGPTL3Q9Y5C1 460 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 NCOR2Q9Y618 2525 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 ANKRD12Q6UB98 2062 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 B4DGG1 531 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 GIPC1O14908 333 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 CER1O95813 267 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 OTCP00480 354 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 VIPP01282 170 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 CFIP05156 583 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 MPSTP25325 297 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 SHMT2P34897 504 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 MPLP40238 635 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 GDF5P43026 501 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 CCR10P46092 362 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 ID4P47928 161 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 FASLGP48023 281 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 CDH13P55290 713 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 PCDH1Q08174 1060 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 CDC16Q13042 620 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 PRKG2Q13237 762 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 NAE1Q13564 534 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 SHBQ15464 509 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 LAIR1Q6GTX8 287 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 OGFOD3Q6PK18 319 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 ATG14Q6ZNE5 492 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 RPS27LQ71UM5 84 aaKnown RBP12.65□□□□□ -0.38
CPNE3-205ENST00000522240 THOC6Q86W42 341 aaKnown RBP12.65□□□□□ -0.38
CPNE3-205ENST00000522240 C17orf82Q86X59 251 aaPredicted RBP12.65□□□□□ -0.38
CPNE3-205ENST00000522240 ZNF781Q8N8C0 355 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 OR2L8Q8NGY9 312 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 PIWIL2Q8TC59 973 aaKnown RBP12.65□□□□□ -0.38
CPNE3-205ENST00000522240 MAPK15Q8TD08 544 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 TRPC4APQ8TEL6 797 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 SMPDL3AQ92484 453 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 ESAMQ96AP7 390 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 MAGEB10Q96LZ2 347 aaPredicted RBP12.65□□□□□ -0.38
CPNE3-205ENST00000522240 NTMT1Q9BV86 223 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 TWSG1Q9GZX9 223 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 PCBD2Q9H0N5 130 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 ATG10Q9H0Y0 220 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 CAAP1Q9H8G2 361 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 ZNF395Q9H8N7 513 aaPredicted RBP12.65□□□□□ -0.38
CPNE3-205ENST00000522240 UCK1Q9HA47 277 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 PRM3Q9NNZ6 103 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 SLC40A1Q9NP59 571 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 ACSS2Q9NR19 701 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 CPNE7Q9UBL6 633 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 PLAGL1Q9UM63 463 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 ICKQ9UPZ9 632 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 TPRP12270 2363 aaKnown RBP12.65□□□□□ -0.38
CPNE3-205ENST00000522240 GON4LQ3T8J9 2241 aa12.65□□□□□ -0.38
CPNE3-205ENST00000522240 EPG5Q9HCE0 2579 aa12.65□□□□□ -0.39
CPNE3-205ENST00000522240 SLCO1B7G3V0H7 640 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 UBFD1O14562 309 aaKnown RBP12.64□□□□□ -0.39
CPNE3-205ENST00000522240 OR7A17O14581 309 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 YY2O15391 372 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 NOBOXO60393 691 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms