RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 SLC7A5P2Q9GIP4 190 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 PLCL2Q9UPR0 1127 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 COMMD10Q9Y6G5 202 aa17.21■□□□□ 0.35
TRAPPC9-211ENST00000521700 CFAP46Q8IYW2 2715 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 A0A1W2PPV9 198 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 CDC14CA4D256 554 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 ARHGEF33A8MVX0 844 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 SMAPO00193 183 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 SEC31AO94979 1220 aaKnown RBP17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 CAPN1P07384 714 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 SFTPCP11686 197 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 GABRB3P28472 473 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 CUL1Q13616 776 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 FASTKQ14296 549 aaKnown RBP17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 CYP2A13Q16696 494 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 PTCHD3Q3KNS1 767 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 TTLL9Q3SXZ7 439 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 FCRL6Q6DN72 434 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 FIGLAQ6QHK4 219 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 CYHR1Q6ZMK1 362 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 SYTL1Q8IYJ3 562 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 RAB42Q8N4Z0 105 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 OR9A1PQ8NGU1 263 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 APOBEC4Q8WW27 367 aaKnown RBP17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 SNF8Q96H20 258 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 GPR21Q99679 349 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 WDR83Q9BRX9 315 aaKnown RBP17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 ADNPQ9H2P0 1102 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 EURLQ9NYK6 297 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 SPATA7Q9P0W8 599 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 TEX264Q9Y6I9 313 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 AP1M2Q9Y6Q5 423 aa17.2■□□□□ 0.34
TRAPPC9-211ENST00000521700 EFCAB8A8MWE9 144 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 B8ZZF3 427 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 HBQ1P09105 142 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 MPC1LP0DKB6 136 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 PSMB5P28074 263 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 GRIA3P42263 894 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 CARSP49589 748 aaKnown RBP17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 MRPS25P82663 173 aaKnown RBP17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 TIAL1Q01085 375 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 ZNF385CQ66K41 422 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 ZNF605Q86T29 641 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 MCATQ8IVS2 390 aaKnown RBP17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 CNTN4Q8IWV2 1026 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 ZNF655Q8N720 491 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 OR2A1Q8NGT9 310 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 CD200R1Q8TD46 325 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 ASB11Q8WXH4 323 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 CERS2Q96G23 380 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 PKP4Q99569 1192 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 STARD5Q9NSY2 213 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 INTS7Q9NVH2 962 aaKnown RBP17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 CHMP2BQ9UQN3 213 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 POLHQ9Y253 713 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 SNX24Q9Y343 169 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 KCNMB2Q9Y691 235 aa17.19■□□□□ 0.34
TRAPPC9-211ENST00000521700 PCM1Q15154 2024 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 MYO1CO00159 1063 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 FKBP9O95302 570 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 AHSGP02765 367 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 CATP04040 527 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 RAB40ALP0C0E4 278 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 CBSLP0DN79 551 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 ERGP11308 486 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 ENO3P13929 434 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 CASQ1P31415 396 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 CBSP35520 551 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 RPL21P46778 160 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 ARL4CP56559 192 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 ETF1P62495 437 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 YBX1P67809 324 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 NFATC3Q12968 1075 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 KCNAB2Q13303 367 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 HIF1AQ16665 826 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 TEDDM1Q5T9Z0 273 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 SYVN1Q86TM6 617 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 CPNE9Q8IYJ1 553 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 ENDOVQ8N8Q3 282 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 SPATA4Q8NEY3 305 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 GABPB2Q8TAK5 448 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 ZUFSPQ96AP4 578 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 LRRC39Q96DD0 335 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 CFAP36Q96G28 342 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 NDNQ99608 321 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 MIPEPQ99797 713 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 NLNQ9BYT8 704 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 FAM117AQ9C073 453 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 FAM114A2Q9NRY5 505 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 SLC17A6Q9P2U8 582 aa17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 ZC3H7BQ9UGR2 993 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-211ENST00000521700 TARM1B6A8C7 271 aa17.17■□□□□ 0.34
TRAPPC9-211ENST00000521700 GFYI3L273 518 aa17.17■□□□□ 0.34
TRAPPC9-211ENST00000521700 ZSCAN9O15535 394 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC9-211ENST00000521700 VPS26AO75436 327 aa17.17■□□□□ 0.34
TRAPPC9-211ENST00000521700 MCM3P25205 808 aa17.17■□□□□ 0.34
TRAPPC9-211ENST00000521700 IL10RAQ13651 578 aa17.17■□□□□ 0.34
TRAPPC9-211ENST00000521700 UGT8Q16880 541 aa17.17■□□□□ 0.34
TRAPPC9-211ENST00000521700 RBM20Q5T481 1227 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms