RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 FAM136AQ96C01 138 aa15.2■□□□□ 0.02
CLN8-205ENST00000520991 FER1L6-AS2Q96M78 137 aa15.2■□□□□ 0.02
CLN8-205ENST00000520991 NUDT9Q9BW91 350 aa15.2■□□□□ 0.02
CLN8-205ENST00000520991 SAMD15Q9P1V8 674 aa15.2■□□□□ 0.02
CLN8-205ENST00000520991 NBASA2RRP1 2371 aa15.2■□□□□ 0.02
CLN8-205ENST00000520991 SNRNP200O75643 2136 aaKnown RBP15.2■□□□□ 0.02
CLN8-205ENST00000520991 SEC16AO15027 2179 aa15.2■□□□□ 0.02
CLN8-205ENST00000520991 MED13Q9UHV7 2174 aa15.2■□□□□ 0.02
CLN8-205ENST00000520991 A0A1B0GX78 115 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 NIPSNAP2O75323 286 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 VPS4BO75351 444 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 AVILO75366 819 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 FKBP9O95302 570 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 IGHEP01854 428 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 KRT14P02533 472 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 ESR1P03372 595 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 GRIA3P42263 894 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 CD97P48960 835 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 KCNJ11Q14654 390 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 TYSND1Q2T9J0 566 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 TCTE1Q5JU00 501 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 KIAA0930Q6ICG6 404 aaPredicted RBP15.19■□□□□ 0.02
CLN8-205ENST00000520991 TTLL10Q6ZVT0 673 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 HPS6Q86YV9 775 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 TTC29Q8NA56 475 aaPredicted RBP15.19■□□□□ 0.02
CLN8-205ENST00000520991 LPGAT1Q92604 370 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 PTERQ96BW5 349 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 BIRC8Q96P09 236 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 TCF12Q99081 682 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 SELENOSQ9BQE4 189 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 VPS4AQ9UN37 437 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 CRYL1Q9Y2S2 319 aa15.19■□□□□ 0.02
CLN8-205ENST00000520991 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.18■□□□□ 0.02
CLN8-205ENST00000520991 KRT87PA6NCN2 255 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 E5RI56 91 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 PIM1P11309 404 aaPredicted RBP15.18■□□□□ 0.02
CLN8-205ENST00000520991 CHRM3P20309 590 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 OGNP20774 298 aaKnown RBP15.18■□□□□ 0.02
CLN8-205ENST00000520991 ATP5DP30049 168 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 GRM7Q14831 915 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 CYP2A13Q16696 494 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 CCSMST1Q4G0I0 132 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 ARMC3Q5W041 872 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 FCRL6Q6DN72 434 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 MRPL14Q6P1L8 145 aaKnown RBP15.18■□□□□ 0.02
CLN8-205ENST00000520991 MAGOHBQ96A72 148 aaKnown RBP15.18■□□□□ 0.02
CLN8-205ENST00000520991 MIPEPQ99797 713 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 MFRPQ9BY79 579 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 CUTCQ9NTM9 273 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 ANKMY1Q9P2S6 941 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 VPS9D1Q9Y2B5 631 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 FAM169AQ9Y6X4 670 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 FER1L5A0AVI2 2057 aa15.18■□□□□ 0.02
CLN8-205ENST00000520991 TARM1B6A8C7 271 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 DSCR3O14972 297 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 CNOT3O75175 753 aaKnown RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 SORBS2O94875 1100 aaKnown RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 ALPPP05187 535 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 MCM3P25205 808 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 PSMB5P28074 263 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 MAGEA6P43360 314 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 ADARP55265 1226 aaKnown RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 FOXL2P58012 376 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 DCAF10Q5QP82 559 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 VWA5B1Q5TIE3 1220 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 ANKRD22Q5VYY1 191 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 NEPROQ6NW34 567 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 JMJD6Q6NYC1 403 aaPredicted RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 TTC27Q6P3X3 843 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 FAM26EQ8N5C1 309 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 HMGCLL1Q8TB92 370 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 ZUFSPQ96AP4 578 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 FKBP10Q96AY3 582 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 ZNF669Q96BR6 464 aaPredicted RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 PBKQ96KB5 322 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 SMAD5Q99717 465 aaKnown RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 SLAMF7Q9NQ25 335 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 P4HTMQ9NXG6 502 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 SPATA7Q9P0W8 599 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 LUZP4Q9P127 313 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 JRKLQ9Y4A0 524 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 PCSK5Q92824 1860 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 PTPN13Q12923 2485 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 CTAGE9A4FU28 777 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 PRICKLE3O43900 615 aaPredicted RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 KLHL41O60662 606 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 MATN4O95460 622 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 UMODP07911 640 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 PKMP14618 531 aaKnown RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 GCGRP47871 477 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 VSX2P58304 361 aaPredicted RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 THOC5Q13769 683 aaKnown RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 DHX34Q14147 1143 aaKnown RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 YOD1Q5VVQ6 348 aaPredicted RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 SLC6A19Q695T7 634 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 ZNF470Q6ECI4 717 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 PPP1R32Q7Z5V6 425 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 CAND1Q86VP6 1230 aaKnown RBP15.17■□□□□ 0.02
CLN8-205ENST00000520991 CILP2Q8IUL8 1156 aa15.17■□□□□ 0.02
CLN8-205ENST00000520991 GALNT16Q8N428 558 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms