RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 ASB1Q9Y576 335 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 FAM149AA5PLN7 773 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 DLX3O60479 287 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 ZWINTO95229 277 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 GUCA1CO95843 209 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 SLC16A8O95907 504 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 MT-CO3P00414 261 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 NR1D1P20393 614 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 MPSTP25325 297 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 PKLRP30613 574 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 AP1S2P56377 157 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 HSP90B2PQ58FF3 399 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 FBXO48Q5FWF7 155 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 ZYG11AQ6WRX3 759 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 RAB44Q7Z6P3 723 aaPredicted RBP14.83□□□□□ -0.04
LSM1-203ENST00000520755 LRRC56Q8IYG6 542 aaPredicted RBP14.83□□□□□ -0.04
LSM1-203ENST00000520755 ANKRD42Q8N9B4 389 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 OR9A1PQ8NGU1 263 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 MDM1Q8TC05 714 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 RHBDF1Q96CC6 855 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 MECRQ9BV79 373 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 TWSG1Q9GZX9 223 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 SRMSQ9H3Y6 488 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 EPB41L1Q9H4G0 881 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 ARL15Q9NXU5 204 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 STOX2Q9P2F5 926 aaPredicted RBP14.83□□□□□ -0.04
LSM1-203ENST00000520755 COPG2Q9UBF2 871 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 CLCA2Q9UQC9 943 aa14.83□□□□□ -0.04
LSM1-203ENST00000520755 OR6C74A6NCV1 312 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 LRRC14BA6NHZ5 514 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 SYCE1LA8MT33 242 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 TAPBPO15533 448 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 HYAL3O43820 417 aaPredicted RBP14.82□□□□□ -0.04
LSM1-203ENST00000520755 KDM1AO60341 852 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 HOXB3P14651 431 aaPredicted RBP14.82□□□□□ -0.04
LSM1-203ENST00000520755 JUPP14923 745 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 MAP4P27816 1152 aaKnown RBP14.82□□□□□ -0.04
LSM1-203ENST00000520755 CAPZBP47756 277 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 SERPINB4P48594 390 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 AGTR2P50052 363 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 NFKB2Q00653 900 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 CFHR1Q03591 330 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 CDCP2Q5VXM1 449 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 KLHL35Q6PF15 583 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 TMPRSS9Q7Z410 1059 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 AMIGO1Q86WK6 493 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 OOSP2Q86WS3 158 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 TMPRSS12Q86WS5 348 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 MARCH9Q86YJ5 346 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 LINC01555Q8NAE3 123 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 RDH11Q8TC12 318 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 MAGEC3Q8TD91 643 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 MCOLN3Q8TDD5 553 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 UBTD2Q8WUN7 234 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 ZNF480Q8WV37 535 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 RAD51AP1Q96B01 352 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 FBXL8Q96CD0 374 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 HRASLS2Q9NWW9 162 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 CD274Q9NZQ7 290 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 TMEM9Q9P0T7 183 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 SPATA7Q9P0W8 599 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 KLHL3Q9UH77 587 aa14.82□□□□□ -0.04
LSM1-203ENST00000520755 OR5K3A6NET4 321 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 CSO75390 466 aaKnown RBP14.81□□□□□ -0.04
LSM1-203ENST00000520755 MYL2P10916 166 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 POLR2CP19387 275 aaPredicted RBP14.81□□□□□ -0.04
LSM1-203ENST00000520755 ATP5F1P24539 256 aaPredicted RBP14.81□□□□□ -0.04
LSM1-203ENST00000520755 OAS2P29728 719 aaKnown RBP14.81□□□□□ -0.04
LSM1-203ENST00000520755 PEBP1P30086 187 aaKnown RBP14.81□□□□□ -0.04
LSM1-203ENST00000520755 ALDH3A1P30838 453 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 SHMT2P34897 504 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 SLC6A12P48065 614 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 GFERP55789 205 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 PPP1CAP62136 330 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 PRKAA1Q13131 559 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 GPS2Q13227 327 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 SQSTM1Q13501 440 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 FASTKQ14296 549 aaKnown RBP14.81□□□□□ -0.04
LSM1-203ENST00000520755 SETDB1Q15047 1291 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 CLPPQ16740 277 aaPredicted RBP14.81□□□□□ -0.04
LSM1-203ENST00000520755 CDKL4Q5MAI5 379 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 SNAP47Q5SQN1 464 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 PHF19Q5T6S3 580 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 ARMC6Q6NXE6 501 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 IRGCQ6NXR0 463 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 TMPRSS7Q7RTY8 843 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 B3GNT8Q7Z7M8 397 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 GALNT15Q8N3T1 639 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 FBXO39Q8N4B4 442 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 PTGR2Q8N8N7 351 aaPredicted RBP14.81□□□□□ -0.04
LSM1-203ENST00000520755 PPFIBP2Q8ND30 876 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 MGARPQ8TDB4 240 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 ESAMQ96AP7 390 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 CCDC138Q96M89 665 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 TGM7Q96PF1 710 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 TMEM237Q96Q45 408 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 DEPDC7Q96QD5 511 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 EGFL8Q99944 293 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 SEMA6CQ9H3T2 930 aa14.81□□□□□ -0.04
LSM1-203ENST00000520755 ACSS2Q9NR19 701 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms