RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 MED19A0JLT2 244 aaPredicted RBP3.84□□□□□ -1.79
SQLE-204ENST00000520493 KRT87PA6NCN2 255 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 OR5K3A6NET4 321 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 NEMP2A6NFY4 417 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 YDJCA8MPS7 323 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 MID1O15344 667 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 GAS8-AS1O95177 125 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 PMS2P2O95744 297 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 PLGP00747 810 aaPredicted RBP3.84□□□□□ -1.79
SQLE-204ENST00000520493 IGHV2-70P01814 119 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 SLC4A1P02730 911 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 RLN1P04808 185 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 GM2AP17900 193 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 CORO1AP31146 461 aaKnown RBP3.84□□□□□ -1.79
SQLE-204ENST00000520493 SLC6A6P31641 620 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 TMPOP42166 694 aaKnown RBP3.84□□□□□ -1.79
SQLE-204ENST00000520493 FRKP42685 505 aaPredicted RBP3.84□□□□□ -1.79
SQLE-204ENST00000520493 MLLT10P55197 1068 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 POLR2LP62875 67 aaKnown RBP3.84□□□□□ -1.79
SQLE-204ENST00000520493 PTPN14Q15678 1187 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 MDH1BQ5I0G3 518 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 GRTP1Q5TC63 336 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 ETFRF1Q6IPR1 90 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 NOTUMQ6P988 496 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 SLC27A1Q6PCB7 646 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 NHLRC1Q6VVB1 395 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 GDPD4Q6W3E5 623 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 BTN2A1Q7KYR7 527 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 KCTD9Q7L273 389 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 TLK2Q86UE8 772 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 SFR1Q86XK3 245 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 MAB21L3Q8N8X9 362 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 SLC4A11Q8NBS3 891 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 ANKRD20A12PQ8NF67 263 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 DBF4BQ8NFT6 615 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 OR2AJ1Q8NGZ0 328 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.84□□□□□ -1.79
SQLE-204ENST00000520493 BCL2L2Q92843 193 aaPredicted RBP3.84□□□□□ -1.79
SQLE-204ENST00000520493 CD101Q93033 1021 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 PHF21AQ96BD5 680 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 CDCA5Q96FF9 252 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 C3orf30Q96M34 536 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 RUNDC3BQ96NL0 473 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 GAL3ST4Q96RP7 486 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 KATNB1Q9BVA0 655 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 CACNG6Q9BXT2 260 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 LRMDAQ9H2I8 198 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 FN3KQ9H479 309 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 UBTD1Q9HAC8 227 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 NOX4Q9NPH5 578 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 NPAP1Q9NZP6 1156 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 RHCGQ9UBD6 479 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 TRPC4Q9UBN4 977 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 BLOC1S6Q9UL45 172 aa3.84□□□□□ -1.79
SQLE-204ENST00000520493 ZCWPW2A0A1B0GU75 182 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 PRSS51A0A1B0GVH4 220 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 SLC9B1P1A6NJY1 282 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 HNRNPCL2B2RXH8 293 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 PRAC2D3DTV9 90 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 FAM86B1E9PN63 330 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 TULP2O00295 520 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 NDC80O14777 642 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 EIF3DO15371 548 aaKnown RBP eCLIP3.83□□□□□ -1.8
SQLE-204ENST00000520493 TXNL1O43396 289 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 LMX1BO60663 402 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 STAM2O75886 525 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 BCAS2O75934 225 aaPredicted RBP3.83□□□□□ -1.8
SQLE-204ENST00000520493 CLDN14O95500 239 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 INHBAP08476 426 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 HMOX1P09601 288 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 FAM86B2P0C5J1 330 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 FAM106CPP0CH98 169 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 CSF2RAP15509 400 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 ITIH1P19827 911 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 LHX1P48742 406 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 HNRNPKP61978 463 aaKnown RBP eCLIP3.83□□□□□ -1.8
SQLE-204ENST00000520493 PNRC1Q12796 327 aaPredicted RBP3.83□□□□□ -1.8
SQLE-204ENST00000520493 PLA2G7Q13093 441 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 HFEQ30201 348 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 ACCSLQ4AC99 568 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 STPG1Q5TH74 334 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 TXNRD3NBQ6F5E7 133 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 MFSD12Q6NUT3 480 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 KLC3Q6P597 504 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 C9orf139Q6ZV77 190 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 PHLDB2Q86SQ0 1253 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 NUDT13Q86X67 352 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 DCUN1D3Q8IWE4 304 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 MRPL43Q8N983 215 aaKnown RBP3.83□□□□□ -1.8
SQLE-204ENST00000520493 LPCAT1Q8NF37 534 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 OR52I2Q8NH67 350 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 HMGCLL1Q8TB92 370 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 SORCS1Q8WY21 1168 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 RAD54LQ92698 747 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 CENPTQ96BT3 561 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 DHX58Q96C10 678 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 SNRNP40Q96DI7 357 aaKnown RBP3.83□□□□□ -1.8
SQLE-204ENST00000520493 WBP1Q96G27 269 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 UHRF2Q96PU4 802 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 HNRNPABQ99729 332 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms