RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 PAQR3Q6TCH7 311 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 ZDHHC24Q6UX98 284 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 ZBED8Q8IZ13 594 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 OR2A1Q8NGT9 310 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 OR9A1PQ8NGU1 263 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 EEF1AKMT1Q8WVE0 214 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 ASB11Q8WXH4 323 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 MIPEPQ99797 713 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 NAT9Q9BTE0 207 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 ACAT2Q9BWD1 397 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 CHST8Q9H2A9 424 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 PCMTD2Q9NV79 361 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 MOCS1Q9NZB8 636 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 WHRNQ9P202 907 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 CDC23Q9UJX2 597 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 IKZF3Q9UKT9 509 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 PADI1Q9ULC6 663 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 ANKRD12Q6UB98 2062 aa12.81□□□□□ -0.36
VEGFA-219ENST00000518824 PCSK5Q92824 1860 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 ESYT3A0FGR9 886 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 CXorf49A8MYA2 514 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-219ENST00000518824 GFYI3L273 518 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 MYO1CO00159 1063 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 SMAPO00193 183 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 ZNF749O43361 778 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 CTSVO60911 334 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 CPNE3O75131 537 aaKnown RBP12.8□□□□□ -0.36
VEGFA-219ENST00000518824 VPS26AO75436 327 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 CAPN1P07384 714 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 FAM87AP0C7U9 286 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 MSL3P1P0C860 447 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 MPC1LP0DKB6 136 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 ITGA1P56199 1179 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 FOXL2P58012 376 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 CDC20Q12834 499 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 CBLBQ13191 982 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 SF1Q15637 639 aaKnown RBP12.8□□□□□ -0.36
VEGFA-219ENST00000518824 ZNF385CQ66K41 422 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-219ENST00000518824 FIGLAQ6QHK4 219 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 TMEM207Q6UWW9 146 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 ZNF517Q6ZMY9 492 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-219ENST00000518824 MBOAT1Q6ZNC8 495 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 NEK10Q6ZWH5 1172 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 BPHLQ86WA6 291 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-219ENST00000518824 DSELQ8IZU8 1212 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 DTWD1Q8N5C7 304 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 HMGCLL1Q8TB92 370 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 ZNF480Q8WV37 535 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 ZNF592Q92610 1267 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 MR1Q95460 341 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 LRRC39Q96DD0 335 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 TCTN2Q96GX1 697 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 FOPNLQ96NB1 174 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 LRRC1Q9BTT6 524 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 SLC6A20Q9NP91 592 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 SAYSD1Q9NPB0 183 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-219ENST00000518824 KLHL42Q9P2K6 505 aa12.8□□□□□ -0.36
VEGFA-219ENST00000518824 SEC16AO15027 2179 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 IGKV1-8A0A0C4DH67 115 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 ZNF891A8MT65 544 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-219ENST00000518824 MEN1O00255 615 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 MED26O95402 600 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 TSPAN12O95859 305 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 SLC16A8O95907 504 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 SYF2O95926 243 aaKnown RBP12.79□□□□□ -0.36
VEGFA-219ENST00000518824 C1QAP02745 245 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 CBSLP0DN79 551 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 CYP2A7P20853 494 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 CBSP35520 551 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 CCNFP41002 786 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 PLTPP55058 493 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 GPX6P59796 221 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 MGAT5Q09328 741 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 TSTA3Q13630 321 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-219ENST00000518824 ERV3-1Q14264 604 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 ZNF460Q14592 562 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 ZXDCQ2QGD7 858 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-219ENST00000518824 TTLL9Q3SXZ7 439 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 UBAP2Q5T6F2 1119 aaKnown RBP12.79□□□□□ -0.36
VEGFA-219ENST00000518824 HECTD2Q5U5R9 776 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 C1orf189Q5VU69 101 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 TTC23LQ6PF05 361 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 FAM198BQ6UWH4 519 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 MAATS1Q7Z4T9 603 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 LRRC56Q8IYG6 542 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-219ENST00000518824 ZNF655Q8N720 491 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-219ENST00000518824 GPATCH11Q8N954 259 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 ZSCAN1Q8NBB4 408 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 OR2L3Q8NG85 312 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 OR8K5Q8NH50 307 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 FBXO25Q8TCJ0 367 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 KIAA1143Q96AT1 154 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-219ENST00000518824 CLIP3Q96DZ5 547 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 ACTR5Q9H9F9 607 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-219ENST00000518824 FANCEQ9HB96 536 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 STARD5Q9NSY2 213 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 ABCF3Q9NUQ8 709 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 EURLQ9NYK6 297 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 SPATA7Q9P0W8 599 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms