RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 A0A0A6YYK5 440 aaPredicted RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 LOC285095A0A1B0GVY8 99 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 ISM1B1AKI9 464 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 GAPDHSO14556 408 aaPredicted RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 ASNA1O43681 348 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 F10P00742 488 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 ATP1B2P14415 290 aaPredicted RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 MSX1P28360 303 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 SSR1P43307 286 aaKnown RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 PMP22Q01453 160 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 AP1B1Q10567 949 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 SLC10A2Q12908 348 aaPredicted RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 CEBPEQ15744 281 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 CDKAL1Q5VV42 579 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 DOLPP1Q86YN1 238 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 TBC1D21Q8IYX1 336 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 CLYBLQ8N0X4 340 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 LILRA3Q8N6C8 439 aaPredicted RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 MYRIPQ8NFW9 859 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 LILRB4Q8NHJ6 448 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 FLVCR1-AS1Q8TAF5 88 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 ENOX1Q8TC92 643 aaKnown RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 SLC22A18Q96BI1 424 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 ERGIC2Q96RQ1 377 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 MDFIQ99750 246 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 GLOD4Q9HC38 313 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 LUC7LQ9NQ29 371 aaKnown RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 DNAJB12Q9NXW2 375 aaKnown RBP9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 FAM153AQ9UHL3 310 aa9.39□□□□□ -0.91
SH2D4A-202ENST00000518040 IGHV1-45A0A0A0MS14 117 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 FITM1A5D6W6 292 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 ASPDHA6ND91 283 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 IDSB3KWA1 339 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 NPIPA5E9PKD4 350 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 PPP1R12AO14974 1030 aaPredicted RBP9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 SGTAO43765 313 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 SRP72O76094 671 aaKnown RBP9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 SLCO2B1O94956 709 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 EEF1DP29692 281 aaKnown RBP9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 CHRNB4P30926 498 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 OR1D4P47884 311 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 MEOX1P50221 254 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 UBXN1Q04323 297 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 ZNF33BQ06732 778 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 OLIG2Q13516 323 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 PDK1Q15118 436 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 TEX44Q53QW1 395 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 NAPRTQ6XQN6 538 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 CXXC5Q7LFL8 322 aaKnown RBP9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 TMEM178AQ8NBL3 297 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 SPATA22Q8NHS9 363 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 BLOC1S5Q8TDH9 187 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 LRRN4Q8WUT4 740 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 C8orf44Q96CB5 159 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 C18orf12Q96KH6 178 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 COPS8Q99627 209 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 ISCUQ9H1K1 167 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 SPHK1Q9NYA1 384 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 CRLS1Q9UJA2 301 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 NPIPA1Q9UND3 350 aa9.38□□□□□ -0.91
SH2D4A-202ENST00000518040 IGLV3-12A0A075B6K2 115 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 C2orf81A6NN90 581 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 AGAP14A8MT82 685 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 LGALS16A8MUM7 142 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 GOLGA6L22H0YM25 854 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 MYO1FO00160 1098 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 CDK2AP1O14519 115 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 ADAM10O14672 748 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 RASGRF2O14827 1237 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 PRPF4O43172 522 aaKnown RBP eCLIP9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 SRPX2O60687 465 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 FKBP9O95302 570 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 CD46P15529 392 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 MAGP20916 626 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 ADSLP30566 484 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 EMP2P54851 167 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 ADAM8P78325 824 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 SRSF11Q05519 484 aaKnown RBP9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 TFF3Q07654 80 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 SIRPB2Q5JXA9 342 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 KDELC1Q6UW63 502 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 CLEC17AQ6ZS10 378 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 NCCRP1Q6ZVX7 275 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 PQLC3Q8N755 202 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 HORMAD2Q8N7B1 307 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 NRGNQ92686 78 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 MBD6Q96DN6 1003 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 ZNF354BQ96LW1 612 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 ZNF285Q96NJ3 590 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 NRTNQ99748 197 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 TUBB6Q9BUF5 446 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 CEP41Q9BYV8 373 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 C14orf105Q9NVL8 296 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 ANAPC7Q9UJX3 599 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 ASF1AQ9Y294 204 aa9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 MAP1AP78559 2803 aaPredicted RBP9.37□□□□□ -0.91
SH2D4A-202ENST00000518040 LIN7AO14910 233 aaPredicted RBP9.36□□□□□ -0.91
SH2D4A-202ENST00000518040 PDHA2P29803 388 aa9.36□□□□□ -0.91
SH2D4A-202ENST00000518040 WNT3AP56704 352 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms