RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 TET1Q8NFU7 2136 aa4.27□□□□□ -1.73
LINC00534-201ENST00000517400 LNP1A1A4G5 178 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 TMEM8BA6NDV4 472 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 A8MV72 311 aaPredicted RBP4.26□□□□□ -1.73
LINC00534-201ENST00000517400 ANKRD28O15084 1053 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 MID1O15344 667 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 P4HA2O15460 535 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 INSIG1O15503 277 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 ADAM20O43506 726 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 AVILO75366 819 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 KCNK5O95279 499 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 SMIM10L2AP0DMW4 78 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 SMIM10L2BP0DMW5 78 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 S1PR1P21453 382 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 MARK3P27448 753 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 CDKN2AP42771 156 aaKnown RBP4.26□□□□□ -1.73
LINC00534-201ENST00000517400 HTR6P50406 440 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 FOXG1P55316 489 aaPredicted RBP4.26□□□□□ -1.73
LINC00534-201ENST00000517400 BRWD1-AS2P59051 145 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 PDE1BQ01064 536 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 HYAL1Q12794 435 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 DLG1Q12959 904 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 DLG2Q15700 870 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 SYT16Q17RD7 645 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 KRTCAP3Q53RY4 240 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 GPR180Q86V85 440 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 SYT2Q8N9I0 419 aaPredicted RBP4.26□□□□□ -1.73
LINC00534-201ENST00000517400 OR5R1Q8NH85 324 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 SPATA22Q8NHS9 363 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 NEUROG1Q92886 237 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 ZNF479Q96JC4 524 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 LYZL4Q96KX0 146 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 CEP295NLQ96MC4 621 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 PAFAH2Q99487 392 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 MTERF1Q99551 399 aaKnown RBP4.26□□□□□ -1.73
LINC00534-201ENST00000517400 MRPL1Q9BYD6 325 aaKnown RBP4.26□□□□□ -1.73
LINC00534-201ENST00000517400 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.26□□□□□ -1.73
LINC00534-201ENST00000517400 BARX2Q9UMQ3 279 aaPredicted RBP4.26□□□□□ -1.73
LINC00534-201ENST00000517400 MRPL11Q9Y3B7 192 aaKnown RBP4.26□□□□□ -1.73
LINC00534-201ENST00000517400 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.26□□□□□ -1.73
LINC00534-201ENST00000517400 PLIN4Q96Q06 1357 aa4.26□□□□□ -1.73
LINC00534-201ENST00000517400 RIF1Q5UIP0 2472 aaKnown RBP4.26□□□□□ -1.73
LINC00534-201ENST00000517400 SRRM3A6NNA2 597 aaPredicted RBP4.25□□□□□ -1.73
LINC00534-201ENST00000517400 MBTPS2O43462 519 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 SMAD6O43541 496 aaKnown RBP4.25□□□□□ -1.73
LINC00534-201ENST00000517400 PLPP2O43688 288 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 TBX10O75333 385 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 RSL1D1O76021 490 aaKnown RBP4.25□□□□□ -1.73
LINC00534-201ENST00000517400 KDM4BO94953 1096 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 CXCL10P02778 98 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 LGALS2P05162 132 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 NGFRP08138 427 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 LINC00271P0C7V0 271 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 HSPD1P10809 573 aaKnown RBP4.25□□□□□ -1.73
LINC00534-201ENST00000517400 PDHBP11177 359 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 PRLRP16471 622 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 MX1P20591 662 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 CCND2P30279 289 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 LMAN1P49257 510 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 THBS3P49746 956 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 VCPP55072 806 aaKnown RBP4.25□□□□□ -1.73
LINC00534-201ENST00000517400 CLDN20P56880 219 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 GPNMBQ14956 572 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 QRICH1Q2TAL8 776 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 C20orf194Q5TEA3 1177 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 PLPP4Q5VZY2 271 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 TMCO3Q6UWJ1 677 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 TRMT1LQ7Z2T5 733 aaKnown RBP4.25□□□□□ -1.73
LINC00534-201ENST00000517400 DNAAF5Q86Y56 855 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 SPATA2LQ8IUW3 424 aaPredicted RBP4.25□□□□□ -1.73
LINC00534-201ENST00000517400 CEP97Q8IW35 865 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 MINDY1Q8N5J2 469 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 GCSAMQ8N6F7 178 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 EMC1Q8N766 993 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 RBMXL3Q8N7X1 1067 aaKnown RBP4.25□□□□□ -1.73
LINC00534-201ENST00000517400 AVL9Q8NBF6 648 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 PPTC7Q8NI37 304 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 GSDMBQ8TAX9 411 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 HMGCLL1Q8TB92 370 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 PTPMT1Q8WUK0 201 aaPredicted RBP4.25□□□□□ -1.73
LINC00534-201ENST00000517400 QRFPRQ96P65 431 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 ZNF385AQ96PM9 386 aaKnown RBP4.25□□□□□ -1.73
LINC00534-201ENST00000517400 GCNAQ96QF7 691 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 GFI1Q99684 422 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 UBAC1Q9BSL1 405 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 RTN4RQ9BZR6 473 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 DENND2DQ9H6A0 471 aaPredicted RBP4.25□□□□□ -1.73
LINC00534-201ENST00000517400 GAREM1Q9H706 876 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 TLE6Q9H808 572 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 PXMP2Q9NR77 195 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 TMEM30AQ9NV96 361 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 ZNF224Q9NZL3 707 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 SIX4Q9UIU6 781 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 KLHL20Q9Y2M5 609 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 VPS13AQ96RL7 3174 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 CACNA1HO95180 2353 aa4.25□□□□□ -1.73
LINC00534-201ENST00000517400 ABCB11O95342 1321 aa4.24□□□□□ -1.73
LINC00534-201ENST00000517400 NEDD4P46934 1319 aa4.24□□□□□ -1.73
LINC00534-201ENST00000517400 ADGRA3Q8IWK6 1321 aa4.24□□□□□ -1.73
LINC00534-201ENST00000517400 TANC1Q9C0D5 1861 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 183.8 ms