RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 DSC3Q14574 896 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CLCA4Q14CN2 919 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PON2Q15165 354 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TAF1CQ15572 869 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TAF12Q16514 161 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CTF1Q16619 201 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NDUFA9Q16795 377 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DUOXA1Q1HG43 343 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 VMACQ2NL98 169 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TMEM44Q2T9K0 475 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ARMCX4Q5H9R4 360 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PITRM1Q5JRX3 1037 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 HABP4Q5JVS0 413 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CTSL3PQ5NE16 218 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PLEKHS1Q5SXH7 462 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MPP7Q5T2T1 576 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SPRYD7Q5W111 196 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 KIAA1841Q6NSI8 718 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZNF544Q6NX49 715 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ERAP2Q6P179 960 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DUS1LQ6P1R4 473 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PNCKQ6P2M8 343 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TRIM40Q6P9F5 258 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SBSNQ6UWP8 590 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 XKR5Q6UX68 686 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SLC16A12Q6ZSM3 486 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 Q6ZSR9 355 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TPGS1Q6ZTW0 290 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 EIF3MQ7L2H7 374 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CAMKMTQ7Z624 323 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZNF605Q86T29 641 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RNF180Q86T96 592 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZNF598Q86UK7 904 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZSWIM9Q86XI8 627 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CALHM3Q86XJ0 350 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DCP2Q8IU60 420 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SYT12Q8IV01 421 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RAVER1Q8IY67 606 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TMEM130Q8N3G9 435 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PGBD5Q8N414 524 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 LIX1Q8N485 282 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CPA6Q8N4T0 437 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 LINC00471Q8N535 108 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OXR1Q8N573 874 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 BEND7Q8N7W2 519 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 L3MBTL4Q8NA19 623 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TTC29Q8NA56 475 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SIDT2Q8NBJ9 832 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NETO2Q8NC67 525 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 C11orf65Q8NCR3 313 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OR52B6Q8NGF0 335 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OR8J2Q8NGG1 315 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OR6Q1Q8NGQ2 317 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OR2T11Q8NH01 316 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NPLOC4Q8TAT6 608 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SLC22A17Q8WUG5 538 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 EEF1AKMT1Q8WVE0 214 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SNRNP27Q8WVK2 155 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SELENOMQ8WWX9 145 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GEMIN6Q8WXD5 167 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 BRI3BPQ8WY22 251 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TRIB2Q92519 343 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NR4A3Q92570 626 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 AP3S1Q92572 193 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CLP1Q92989 425 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SLC38A4Q969I6 547 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 UBE2E3Q969T4 207 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FKBP10Q96AY3 582 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RHBDF1Q96CC6 855 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 LGALS12Q96DT0 336 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MTERF3Q96E29 417 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ASIC4Q96FT7 647 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TRMT2BQ96GJ1 504 aaKnown RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 HRASLS5Q96KN8 279 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FOPNLQ96NB1 174 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TMEM74Q96NL1 305 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 COL21A1Q96P44 957 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PGLYRP2Q96PD5 576 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PANX1Q96RD7 426 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 KCNA7Q96RP8 456 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 LYSMD1Q96S90 227 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MBOAT4Q96T53 435 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ACOX2Q99424 681 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 COPS8Q99627 209 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SEPT5Q99719 369 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ADAM2Q99965 735 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MAPKAP1Q9BPZ7 522 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SGIP1Q9BQI5 828 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CPPED1Q9BRF8 314 aaPredicted RBP3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SPON2Q9BUD6 331 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TEX12Q9BXU0 123 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CIPCQ9C0C6 399 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OR2B2Q9GZK3 357 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 KLHL25Q9H0H3 589 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CXCL16Q9H2A7 254 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TMEM245Q9H330 911 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DSN1Q9H410 356 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DUSP21Q9H596 190 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RUBCNLQ9H714 662 aa3.29□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 LIN28AQ9H9Z2 209 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms