RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 SNRPD1P62314 119 aaKnown RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RBX1P62877 108 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 KCNJ2P63252 427 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CXADRP78310 365 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RPP30P78346 268 aaKnown RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PSG4Q00888 419 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FMO1Q01740 532 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PPARDQ03181 441 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LOXL1Q08397 574 aaPredicted RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DSC1Q08554 894 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FCHO2Q0JRZ9 810 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SMARCB1Q12824 385 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FAPQ12884 760 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TRIM26Q12899 539 aaPredicted RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TRAF1Q13077 416 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CALCOCO2Q13137 446 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ACVR2BQ13705 512 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZNF460Q14592 562 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HERPUD1Q15011 391 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 EFTUD2Q15029 972 aaKnown RBP eCLIP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TCEAL1Q15170 157 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NONOQ15233 471 aaKnown RBP eCLIP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TAB1Q15750 504 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MLF2Q15773 248 aaPredicted RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CNGA2Q16280 664 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TAL2Q16559 108 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SLC18A3Q16572 532 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PFKFB3Q16875 520 aaPredicted RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TXNRD1Q16881 649 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SKIDA1Q1XH10 827 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TMEM241Q24JQ0 296 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 EXOC3L2Q2M3D2 409 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 C15orf59Q2T9L4 293 aaPredicted RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DEFB116Q30KQ4 102 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CEACAM21Q3KPI0 293 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DPCR1Q3MIW9 517 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TRIM60Q495X7 471 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LRRC24Q50LG9 513 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 EPC2Q52LR7 807 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 YIF1BQ5BJH7 314 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LRRC73Q5JTD7 316 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TBCELQ5QJ74 424 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TTC39AQ5SRH9 613 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FAM83BQ5T0W9 1011 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 C10orf76Q5T2E6 689 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HDGFL1Q5TGJ6 251 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LRRC38Q5VT99 294 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 WDR78Q5VTH9 848 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SFMBT2Q5VUG0 894 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 KIAA0319Q5VV43 1072 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GARNL3Q5VVW2 1013 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TYW1BQ6NUM6 668 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MFSD12Q6NUT3 480 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PGBD2Q6P3X8 592 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZNF773Q6PK81 442 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FAM111BQ6SJ93 734 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SLC4A10Q6U841 1118 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 METAP1DQ6UB28 335 aaPredicted RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SPINT4Q6UDR6 99 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 AFTPHQ6ULP2 937 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CLPSL2Q6UWE3 100 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FAM180AQ6UWF9 173 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HRCT1Q6UXD1 115 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ATF7IPQ6VMQ6 1270 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RBMS3Q6XE24 437 aaKnown RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LRRC69Q6ZNQ3 347 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 Q6ZQT7 251 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 IDO2Q6ZQW0 420 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 Q6ZSR9 355 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LRRC8DQ7L1W4 858 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CXXC5Q7LFL8 322 aaKnown RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CHST15Q7LFX5 561 aaPredicted RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SLC29A4Q7RTT9 530 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MRPL21Q7Z2W9 205 aaKnown RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TRAPPC11Q7Z392 1133 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 UBE3DQ7Z6J8 389 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ADGRG6Q86SQ4 1221 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 BIVMQ86UB2 503 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MARCH3Q86UD3 253 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TPRA1Q86W33 373 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 AMZ2Q86W34 360 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 THOC6Q86W42 341 aaKnown RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LHFPL1Q86WI0 220 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NUDT13Q86X67 352 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SPATS2Q86XZ4 545 aaKnown RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MIB1Q86YT6 1006 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CALHM1Q8IU99 346 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZDHHC21Q8IVQ6 265 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SUGP1Q8IWZ8 645 aaKnown RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CCAR1Q8IX12 1150 aaKnown RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DHX40Q8IX18 779 aaKnown RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 UBALD2Q8IYN6 164 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZDHHC23Q8IYP9 409 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 KIAA2013Q8IYS2 634 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RTKN2Q8IZC4 609 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 C1orf158Q8N1D5 194 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GHDCQ8N2G8 530 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZGPATQ8N5A5 531 aaKnown RBP-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DHRSXQ8N5I4 330 aa-0.78□□□□□ -2.53
SCARNA20.2-201ENST00000516052 C2orf73Q8N5S3 287 aaPredicted RBP-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms