RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 DENND4BO75064 1496 aaPredicted RBP3.35□□□□□ -1.87
LINC01088-211ENST00000515597 ZMYM4Q5VZL5 1548 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 LRRC7Q96NW7 1537 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 KIAA0556O60303 1618 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 MSGN1A6NI15 193 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 HEPACAM2A8MVW5 462 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 K7ENM7 598 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 GAPDHSO14556 408 aaPredicted RBP3.34□□□□□ -1.87
LINC01088-211ENST00000515597 IPO8O15397 1037 aaKnown RBP3.34□□□□□ -1.87
LINC01088-211ENST00000515597 ZWINTO95229 277 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 TRIM21P19474 475 aaKnown RBP3.34□□□□□ -1.87
LINC01088-211ENST00000515597 SLC6A6P31641 620 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 ACSL1P33121 698 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 PCLAFQ15004 111 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 CFAP161Q6P656 301 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 DCLK2Q8N568 766 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 AMER3Q8N944 861 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 TRIML1Q8N9V2 468 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 OR4C3Q8NH37 302 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 AGAP3Q96P47 875 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 CDRT15Q96T59 188 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 PKP2Q99959 881 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 WSB2Q9NYS7 404 aaPredicted RBP3.34□□□□□ -1.87
LINC01088-211ENST00000515597 STK26Q9P289 416 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 MTUS1Q9ULD2 1270 aa3.34□□□□□ -1.87
LINC01088-211ENST00000515597 PPIEQ9UNP9 301 aaKnown RBP3.34□□□□□ -1.87
LINC01088-211ENST00000515597 POGZQ7Z3K3 1410 aa3.34□□□□□ -1.88
LINC01088-211ENST00000515597 ZFYVE16Q7Z3T8 1539 aa3.34□□□□□ -1.88
LINC01088-211ENST00000515597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.34□□□□□ -1.88
LINC01088-211ENST00000515597 GLOD5A6NK44 160 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 A8MV72 311 aaPredicted RBP3.33□□□□□ -1.88
LINC01088-211ENST00000515597 RNASEH1O60930 286 aaKnown RBP3.33□□□□□ -1.88
LINC01088-211ENST00000515597 ENTPD3O75355 529 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 GJB3O75712 270 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 DFFBO76075 338 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 BEST1O76090 585 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 ACTN2P35609 894 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 CDK3Q00526 305 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 GRAPQ13588 217 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 HNRNPDQ14103 355 aaKnown RBP3.33□□□□□ -1.88
LINC01088-211ENST00000515597 SNAI3Q3KNW1 292 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 IL27RAQ6UWB1 636 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 DNAAF5Q86Y56 855 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 FBXO39Q8N4B4 442 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 MINDY1Q8N5J2 469 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 OR5AP2Q8NGF4 316 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 OR13J1Q8NGT2 312 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 PTPMT1Q8WUK0 201 aaPredicted RBP3.33□□□□□ -1.88
LINC01088-211ENST00000515597 ZNF622Q969S3 477 aaKnown RBP eCLIP3.33□□□□□ -1.883e-6■■□□□ 12.6
LINC01088-211ENST00000515597 SLC22A18Q96BI1 424 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 KRT12Q99456 494 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 FUCA2Q9BTY2 467 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 CLEC7AQ9BXN2 247 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 DPAGT1Q9H3H5 408 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.33□□□□□ -1.88
LINC01088-211ENST00000515597 OSER1Q9NX31 292 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 CPSF2Q9P2I0 782 aaKnown RBP3.33□□□□□ -1.88
LINC01088-211ENST00000515597 CHORDC1Q9UHD1 332 aaPredicted RBP3.33□□□□□ -1.88
LINC01088-211ENST00000515597 NME7Q9Y5B8 376 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 ZHX2Q9Y6X8 837 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 ATP10AO60312 1499 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 BIVM-ERCC5R4GMW8 1640 aa3.33□□□□□ -1.88
LINC01088-211ENST00000515597 XIRP1Q702N8 1843 aaKnown RBP3.33□□□□□ -1.88
LINC01088-211ENST00000515597 GPR75-ASB3A0A0A6YYF3 556 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 HYKKA2RU49 373 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 ADAMDEC1O15204 470 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 MED24O75448 989 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 TRIM49P0CI25 452 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 TRIM49CP0CI26 452 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 GATA2P23769 480 aaPredicted RBP3.32□□□□□ -1.88
LINC01088-211ENST00000515597 NNMTP40261 264 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 HERV-K104P61576 105 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 BAATQ14032 418 aaPredicted RBP3.32□□□□□ -1.88
LINC01088-211ENST00000515597 SGSM1Q2NKQ1 1148 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 TCTEX1D4Q5JR98 221 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 ADGRA1Q86SQ6 560 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 TMEM173Q86WV6 379 aaPredicted RBP3.32□□□□□ -1.88
LINC01088-211ENST00000515597 CEP57Q86XR8 500 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 FAM114A1Q8IWE2 563 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 GUF1Q8N442 669 aaKnown RBP3.32□□□□□ -1.88
LINC01088-211ENST00000515597 KBTBD8Q8NFY9 601 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 OR2AJ1Q8NGZ0 328 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 EXD1Q8NHP7 514 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 IRGQQ8WZA9 623 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 LPGAT1Q92604 370 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 ZNF300Q96RE9 604 aaPredicted RBP3.32□□□□□ -1.88
LINC01088-211ENST00000515597 LMF2Q9BU23 707 aaKnown RBP3.32□□□□□ -1.88
LINC01088-211ENST00000515597 FNDC11Q9BVV2 318 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 MXD3Q9BW11 206 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 ATP13A3Q9H7F0 1226 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 FGF21Q9NSA1 209 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 ERAP1Q9NZ08 941 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 RPS6KA6Q9UK32 745 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 RGS12O14924 1447 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 PTPRKQ15262 1439 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 PLA2R1Q13018 1463 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 CPS1P31327 1500 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 UGGT2Q9NYU1 1516 aa3.32□□□□□ -1.88
LINC01088-211ENST00000515597 LOC102723996A0A087X1L8 192 aa3.31□□□□□ -1.88
LINC01088-211ENST00000515597 XRCC3O43542 346 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms