RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 A0A1W2PRQ8 180 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 CASTOR2A6NHX0 329 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 ANXA2P2A6NMY6 339 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 ENO4A6NNW6 628 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 NADKO95544 446 aaPredicted RBP4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 GSRP00390 522 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 IGHV4-59P01825 116 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 SP1P08047 785 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 SCG2P13521 617 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 PRKCIP41743 596 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 CRKLP46109 303 aaKnown RBP4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 ROR1Q01973 937 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 KIAA1644Q3SXP7 199 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 FAM53AQ6NSI3 398 aaPredicted RBP4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 IL17RELQ6ZVW7 336 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 BHLHA9Q7RTU4 235 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 SLC16A9Q7RTY1 509 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 GALNTL5Q7Z4T8 443 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 APLFQ8IW19 511 aaPredicted RBP4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 OR10Q1Q8NGQ4 319 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 OR52N5Q8NH56 324 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 OCC1Q8TAD7 63 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 FAM71F1Q96KD3 344 aaPredicted RBP4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 CCDC3Q9BQI4 270 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 URM1Q9BTM9 101 aaKnown RBP4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 SHARPINQ9H0F6 387 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 PFDN4Q9NQP4 134 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 FGF21Q9NSA1 209 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 STUB1Q9UNE7 303 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 KCNJ14Q9UNX9 436 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 HEG1Q9ULI3 1381 aa4.64□□□□□ -1.67
HMGCS1-207ENST00000514610 A0A087WV48 116 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 TBCAO75347 108 aaKnown RBP4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 ATP6AP2O75787 350 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 DDHD2O94830 711 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 AMBPP02760 352 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 PATE4P0C8F1 98 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 PRSS56P0CW18 603 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 IRF2P14316 349 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 CDH3P22223 829 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 ITGA3P26006 1051 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 GSDMDP57764 484 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 DLK1P80370 383 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 GCNT1Q02742 428 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 SQLEQ14534 574 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 HERC3Q15034 1050 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 SLC25A53Q5H9E4 307 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 DNAJB7Q7Z6W7 309 aaPredicted RBP4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 PIGZQ86VD9 579 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 OR2B2Q9GZK3 357 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 FN3KQ9H479 309 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 TLE6Q9H808 572 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 INTS9Q9NV88 658 aaKnown RBP4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 P4HTMQ9NXG6 502 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 ZNF112Q9UJU3 913 aa4.63□□□□□ -1.67
HMGCS1-207ENST00000514610 TCF20Q9UGU0 1960 aaKnown RBP4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 FAM86B1E9PN63 330 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 FAM72CH0Y354 149 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 BLOC1S5-TXNDC5H3BN57 136 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 ARPC2O15144 300 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 CAVIN2O95810 425 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 GBAP04062 536 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 GPIP06744 558 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 FAM86B2P0C5J1 330 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 PLA2G4BP0C869 781 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 PDGFRAP16234 1089 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 ADRA2CP18825 462 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 CA6P23280 308 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 ANOS1P23352 680 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 ACAT1P24752 427 aaKnown RBP4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 NKX2-1P43699 371 aaPredicted RBP4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 GMPSP49915 693 aaPredicted RBP4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 MAZP56270 477 aaKnown RBP4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 LACTB2Q53H82 288 aaPredicted RBP4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 C9orf50Q5SZB4 431 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 MPP7Q5T2T1 576 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 FAM72AQ5TYM5 149 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 SUSD4Q5VX71 490 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 ARHGAP17Q68EM7 881 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 FAM72DQ6L9T8 149 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 SHQ1Q6PI26 577 aaKnown RBP4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 C15orf39Q6ZRI6 1047 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 SH2D5Q6ZV89 423 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 ZNF329Q86UD4 541 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 FAM72BQ86X60 149 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 METTL23Q86XA0 190 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 KLHDC8BQ8IXV7 354 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 LGI2Q8N0V4 545 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 OR4K1Q8NGD4 311 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 OR4C3Q8NH37 302 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 PROX1Q92786 737 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 GBP5Q96PP8 586 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 INTS14Q96SY0 518 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 EGFL8Q99944 293 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 MIS12Q9H081 205 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 XAB2Q9HCS7 855 aaKnown RBP4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 FLRT3Q9NZU0 649 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 TCF19Q9Y242 345 aa4.62□□□□□ -1.67
HMGCS1-207ENST00000514610 TRAV34A0A0B4J273 112 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms