RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 TEFMQ96QE5 360 aaKnown RBP13.46□□□□□ -0.25
USP46-209ENST00000514536 GPR22Q99680 433 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 ZPBPQ9BS86 351 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 SLC12A9Q9BXP2 914 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 PARVBQ9HBI1 364 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 GPAMQ9HCL2 828 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 PDE7BQ9NP56 450 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 WDR70Q9NW82 654 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.46□□□□□ -0.25
USP46-209ENST00000514536 IKZF3Q9UKT9 509 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 ACSL6Q9UKU0 697 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 RARRES3Q9UL19 164 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 PDE10AQ9Y233 779 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 KLHL20Q9Y2M5 609 aa13.46□□□□□ -0.25
USP46-209ENST00000514536 APC2O95996 2303 aa13.46□□□□□ -0.26
USP46-209ENST00000514536 A0A1W2PPV9 198 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 PHGDHO43175 533 aaKnown RBP13.45□□□□□ -0.26
USP46-209ENST00000514536 SLC16A8O95907 504 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 ERGP11308 486 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 PSMB5P28074 263 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 DEKP35659 375 aaKnown RBP13.45□□□□□ -0.26
USP46-209ENST00000514536 HSD17B2P37059 387 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 PNLIPRP1P54315 467 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 SP140Q13342 867 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 ARHGAP19Q14CB8 494 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 TGIF1Q15583 401 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 ZIC1Q15915 447 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 UAP1Q16222 522 aaPredicted RBP13.45□□□□□ -0.26
USP46-209ENST00000514536 SUSD1Q6UWL2 747 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 LRRC69Q6ZNQ3 347 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 PPP1R3BQ86XI6 285 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 GSPT2Q8IYD1 628 aaKnown RBP13.45□□□□□ -0.26
USP46-209ENST00000514536 SYTL1Q8IYJ3 562 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 C19orf47Q8N9M1 422 aaKnown RBP13.45□□□□□ -0.26
USP46-209ENST00000514536 PPFIBP2Q8ND30 876 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 ZNF480Q8WV37 535 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 SMPDL3AQ92484 453 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 TSPAN17Q96FV3 270 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 MIPEPQ99797 713 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 FUT8Q9BYC5 575 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 ACSS3Q9H6R3 686 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 POPDC3Q9HBV1 291 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 FAM60AQ9NP50 221 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 ABCF3Q9NUQ8 709 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 URB1O60287 2271 aaKnown RBP13.45□□□□□ -0.26
USP46-209ENST00000514536 PKD1L2Q7Z442 2459 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 KLK10O43240 276 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 HIST1H2AGP0C0S8 130 aaPredicted RBP13.45□□□□□ -0.26
USP46-209ENST00000514536 FGF5P12034 268 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 STMN1P16949 149 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 HIST1H2ADP20671 130 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 CD82P27701 267 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 ITPKBP27987 946 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 PMS2P54278 862 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 TUBB4BP68371 445 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 PHKG1Q16816 387 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 KIAA1614Q5VZ46 1190 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 CYB5D1Q6P9G0 228 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 MBOAT1Q6ZNC8 495 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 CDHR3Q6ZTQ4 885 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 BPHLQ86WA6 291 aaPredicted RBP13.45□□□□□ -0.26
USP46-209ENST00000514536 SPATA6LQ8N4H0 392 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 OR2A1Q8NGT9 310 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 HNRNPLLQ8WVV9 542 aaKnown RBP13.45□□□□□ -0.26
USP46-209ENST00000514536 ZNF501Q96CX3 271 aaPredicted RBP13.45□□□□□ -0.26
USP46-209ENST00000514536 TCTN2Q96GX1 697 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 HIST1H2AHQ96KK5 128 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 CCDC138Q96M89 665 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 HIST1H2AJQ99878 128 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 H2AFJQ9BTM1 129 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 ACAT2Q9BWD1 397 aa13.45□□□□□ -0.26
USP46-209ENST00000514536 FAM208BQ5VWN6 2430 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 A0A087WUV0 522 aaPredicted RBP13.44□□□□□ -0.26
USP46-209ENST00000514536 A0A087WV48 116 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 ZNF839A8K0R7 811 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 E7ENX8 843 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 STMND1H3BQB6 276 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 CDC7O00311 574 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 SLU7O95391 586 aaKnown RBP13.44□□□□□ -0.26
USP46-209ENST00000514536 MYBL2P10244 700 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 LIPCP11150 499 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 ZNF28P17035 718 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 MAGP20916 626 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 IMPA1P29218 277 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 RPA3P35244 121 aaPredicted RBP13.44□□□□□ -0.26
USP46-209ENST00000514536 YBX1P67809 324 aaKnown RBP13.44□□□□□ -0.26
USP46-209ENST00000514536 TAP2Q03519 686 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 CLN3Q13286 438 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.44□□□□□ -0.26
USP46-209ENST00000514536 MROH9Q5TGP6 573 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 PWWP2BQ6NUJ5 590 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 FIGLAQ6QHK4 219 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 TRMT10CQ7L0Y3 403 aaKnown RBP13.44□□□□□ -0.26
USP46-209ENST00000514536 SPACA3Q8IXA5 215 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 TRIM54Q9BYV2 358 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 ULBP3Q9BZM4 244 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 SPRY4Q9C004 299 aa13.44□□□□□ -0.26
USP46-209ENST00000514536 UNKQ9C0B0 810 aaKnown RBP13.44□□□□□ -0.26
USP46-209ENST00000514536 STOX2Q9P2F5 926 aaPredicted RBP13.44□□□□□ -0.26
USP46-209ENST00000514536 ACACAQ13085 2346 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms