RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 SF1Q15637 639 aaKnown RBP18.2■□□□□ 0.5
LPCAT1-206ENST00000514484 SPANXN3Q5MJ09 141 aa18.2■□□□□ 0.5
LPCAT1-206ENST00000514484 HIBCHQ6NVY1 386 aaPredicted RBP18.2■□□□□ 0.5
LPCAT1-206ENST00000514484 FAM198BQ6UWH4 519 aa18.2■□□□□ 0.5
LPCAT1-206ENST00000514484 ZNF517Q6ZMY9 492 aaPredicted RBP18.2■□□□□ 0.5
LPCAT1-206ENST00000514484 GPR135Q8IZ08 494 aa18.2■□□□□ 0.5
LPCAT1-206ENST00000514484 MIPEPQ99797 713 aa18.2■□□□□ 0.5
LPCAT1-206ENST00000514484 TNRC6AQ8NDV7 1962 aaKnown RBP18.2■□□□□ 0.5
LPCAT1-206ENST00000514484 H3BMH7 237 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 PRICKLE3O43900 615 aaPredicted RBP18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 NRP2O60462 931 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 SEC31AO94979 1220 aaKnown RBP18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 ELK3P41970 407 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 GRIA3P42263 894 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 KCNAB2Q13303 367 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 TTLL9Q3SXZ7 439 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 C1orf189Q5VU69 101 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 LMNTD2Q8IXW0 634 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 CPNE9Q8IYJ1 553 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 DNAJC22Q8N4W6 341 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 RAB42Q8N4Z0 105 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 ZNF655Q8N720 491 aaPredicted RBP18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 ENDOVQ8N8Q3 282 aaKnown RBP18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 C2CD4AQ8NCU7 369 aaPredicted RBP18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 CD200R1Q8TD46 325 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 KCNJ9Q92806 393 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 SLC22A18Q96BI1 424 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 SNF8Q96H20 258 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 LRFN5Q96NI6 719 aa18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 AARSD1Q9BTE6 412 aaKnown RBP18.19■□□□□ 0.5
LPCAT1-206ENST00000514484 A0A1W2PPV9 198 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 EFCAB8A8MWE9 144 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 TP73O15350 636 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 ZSCAN9O15535 394 aaPredicted RBP18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 PSIP1O75475 530 aaKnown RBP18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 TTC4O95801 387 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 GABRB3P28472 473 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 RPL21P46778 160 aaKnown RBP18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 RPS15P62841 145 aaKnown RBP18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 YBX1P67809 324 aaKnown RBP18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 C2orf54Q08AI8 447 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 TSTA3Q13630 321 aaPredicted RBP18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 HIF1AQ16665 826 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 CRTC2Q53ET0 693 aaPredicted RBP18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 RBM20Q5T481 1227 aaKnown RBP18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 FCRL6Q6DN72 434 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 TRMT10BQ6PF06 316 aaKnown RBP18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 FIGLAQ6QHK4 219 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 PIWIL4Q7Z3Z4 852 aaKnown RBP18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 ANKMY2Q8IV38 441 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 PDIK1LQ8N165 341 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 OR9A1PQ8NGU1 263 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 MAGEC3Q8TD91 643 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 APOBEC4Q8WW27 367 aaKnown RBP18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 CERS2Q96G23 380 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 ACAT2Q9BWD1 397 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 CHRNA10Q9GZZ6 450 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 PPANQ9NQ55 473 aaKnown RBP18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 GEMIN8Q9NWZ8 242 aaKnown RBP18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 EURLQ9NYK6 297 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 SPATA7Q9P0W8 599 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 DHCR7Q9UBM7 475 aaKnown RBP18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 PLCL2Q9UPR0 1127 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 POLHQ9Y253 713 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 MRFAP1Q9Y605 127 aa18.18■□□□□ 0.5
LPCAT1-206ENST00000514484 CATP04040 527 aaKnown RBP18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 CAPN1P07384 714 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 CBSLP0DN79 551 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 MCM3P25205 808 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 CBSP35520 551 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 CARSP49589 748 aaKnown RBP18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 TIAL1Q01085 375 aaKnown RBP eCLIP18.17■□□□□ 0.55e-6■■■■□ 19.9
LPCAT1-206ENST00000514484 SLC9A5Q14940 896 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 FASTKD3Q14CZ7 662 aaKnown RBP18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 CYP2A13Q16696 494 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 ZNF385CQ66K41 422 aaPredicted RBP18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 SUSD1Q6UWL2 747 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 SYT10Q6XYQ8 523 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 ZNF605Q86T29 641 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 PPFIBP2Q8ND30 876 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 OR2L3Q8NG85 312 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 PKP4Q99569 1192 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 NAT9Q9BTE0 207 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 GPR87Q9BY21 358 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 STARD5Q9NSY2 213 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 INTS7Q9NVH2 962 aaKnown RBP18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 RNF14Q9UBS8 474 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 ZC3H7BQ9UGR2 993 aaKnown RBP18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 FARSAQ9Y285 508 aaKnown RBP18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 MAN2B2Q9Y2E5 1009 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 SNX24Q9Y343 169 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 DHRS7Q9Y394 339 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 KCNMB2Q9Y691 235 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 TEX264Q9Y6I9 313 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 PCSK5Q92824 1860 aa18.17■□□□□ 0.5
LPCAT1-206ENST00000514484 MYO1CO00159 1063 aa18.16■□□□□ 0.5
LPCAT1-206ENST00000514484 VPS26AO75436 327 aa18.16■□□□□ 0.5
LPCAT1-206ENST00000514484 SYF2O95926 243 aaKnown RBP18.16■□□□□ 0.5
LPCAT1-206ENST00000514484 ERGP11308 486 aa18.16■□□□□ 0.5
LPCAT1-206ENST00000514484 PLA2G2AP14555 144 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms