RNA–Protein interactions for RNA: ENST00000514418.1

SEC24D-213, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 3

Gene SEC24D, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-213ENST00000514418 CSTF2P33240 577 aaKnown RBP eCLIP3.57□□□□□ -1.84
SEC24D-213ENST00000514418 WNT5AP41221 380 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 MAGEA11P43364 429 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 GLIPR1P48060 266 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 CRIP2P52943 208 aaPredicted RBP3.57□□□□□ -1.84
SEC24D-213ENST00000514418 ATP12AP54707 1039 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 B3GALT5-AS1P59052 145 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 MAT1AQ00266 395 aaKnown RBP3.57□□□□□ -1.84
SEC24D-213ENST00000514418 KLC1Q07866 573 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 RBM39Q14498 530 aaKnown RBP3.57□□□□□ -1.84
SEC24D-213ENST00000514418 SQLEQ14534 574 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 CA9Q16790 459 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 TLK2Q86UE8 772 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 LGI2Q8N0V4 545 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 RYBPQ8N488 228 aaPredicted RBP3.57□□□□□ -1.84
SEC24D-213ENST00000514418 PI4KAP1Q8N8J0 262 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 DDHD1Q8NEL9 900 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 OR4K1Q8NGD4 311 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 OLIG1Q8TAK6 271 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 SPSB1Q96BD6 273 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 LGALS12Q96DT0 336 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 FNBP1Q96RU3 617 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 CPNE1Q99829 537 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 ANKRD2Q9GZV1 360 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 CDH20Q9HBT6 801 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 ZNF701Q9NV72 531 aaPredicted RBP3.57□□□□□ -1.84
SEC24D-213ENST00000514418 INTS9Q9NV88 658 aaKnown RBP3.57□□□□□ -1.84
SEC24D-213ENST00000514418 MDFICQ9P1T7 246 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 STUB1Q9UNE7 303 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 MRPS28Q9Y2Q9 187 aaKnown RBP3.57□□□□□ -1.84
SEC24D-213ENST00000514418 TRIM17Q9Y577 477 aa3.57□□□□□ -1.84
SEC24D-213ENST00000514418 ARPC2O15144 300 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 EPHB6O15197 1021 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 SAGP10523 405 aaPredicted RBP3.56□□□□□ -1.84
SEC24D-213ENST00000514418 CEACAM1P13688 526 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 FDPSP14324 419 aaKnown RBP3.56□□□□□ -1.84
SEC24D-213ENST00000514418 MYL6BP14649 208 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 GNB3P16520 340 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 CYP11B2P19099 503 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 CD22P20273 847 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 NR0B1P51843 470 aaKnown RBP3.56□□□□□ -1.84
SEC24D-213ENST00000514418 MAZP56270 477 aaKnown RBP3.56□□□□□ -1.84
SEC24D-213ENST00000514418 SNRPD1P62314 119 aaKnown RBP3.56□□□□□ -1.84
SEC24D-213ENST00000514418 POLR2LP62875 67 aaKnown RBP3.56□□□□□ -1.84
SEC24D-213ENST00000514418 SP3Q02447 781 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 TAF10Q12962 218 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 HNRNPDQ14103 355 aaKnown RBP3.56□□□□□ -1.84
SEC24D-213ENST00000514418 P2RY6Q15077 328 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 PHKG1Q16816 387 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 TMEM30BQ3MIR4 351 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 UGT3A2Q3SY77 523 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 LCN1P1Q5VSP4 162 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 ARHGAP17Q68EM7 881 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 ADAM5Q6NVV9 412 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 CCDC186Q7Z3E2 898 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 ADCK2Q7Z695 626 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 PIGZQ86VD9 579 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 OR4C3Q8NH37 302 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 OR52N5Q8NH56 324 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 CENPTQ96BT3 561 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 MAGED4Q96JG8 741 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 FAM20AQ96MK3 541 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 FEVQ99581 238 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 NAA11Q9BSU3 229 aaPredicted RBP3.56□□□□□ -1.84
SEC24D-213ENST00000514418 RBM4Q9BWF3 364 aaKnown RBP3.56□□□□□ -1.84
SEC24D-213ENST00000514418 GTPBP2Q9BX10 602 aaKnown RBP3.56□□□□□ -1.84
SEC24D-213ENST00000514418 ERVMER34-1Q9H9K5 563 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 XAB2Q9HCS7 855 aaKnown RBP3.56□□□□□ -1.84
SEC24D-213ENST00000514418 C5AR2Q9P296 337 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 ANAPC5Q9UJX4 755 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 CCL27Q9Y4X3 112 aa3.56□□□□□ -1.84
SEC24D-213ENST00000514418 C2orf81A6NN90 581 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 KLF11O14901 512 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 AP5Z1O43299 807 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 EIF5BO60841 1220 aaKnown RBP3.55□□□□□ -1.84
SEC24D-213ENST00000514418 DFFBO76075 338 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 PENKP01210 267 aaPredicted RBP3.55□□□□□ -1.84
SEC24D-213ENST00000514418 IGHV4-31P0DP07 118 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 DARSP14868 501 aaKnown RBP3.55□□□□□ -1.84
SEC24D-213ENST00000514418 ALDH4A1P30038 563 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 PTGER4P35408 488 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 LBX1P52954 281 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 RAD23AP54725 363 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 GNB1P62873 340 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 PPIGQ13427 754 aaKnown RBP eCLIP3.55□□□□□ -1.845e-9■■□□□ 13.7
SEC24D-213ENST00000514418 ITGA9Q13797 1035 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 PSMD6Q15008 389 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 SLC35D3Q5M8T2 416 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 SPDYCQ5MJ68 293 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 CEP85LQ5SZL2 805 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 PPP1R21Q6ZMI0 780 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 MMD2Q8IY49 270 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 MAML2Q8IZL2 1156 aaPredicted RBP3.55□□□□□ -1.84
SEC24D-213ENST00000514418 NDUFAF2Q8N183 169 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 RAB42Q8N4Z0 105 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 IQUBQ8NA54 791 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 TRIM58Q8NG06 486 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 KIF18AQ8NI77 898 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 HCAR2Q8TDS4 363 aa3.55□□□□□ -1.84
SEC24D-213ENST00000514418 KCNE4Q8WWG9 221 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms