RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 PHGDHO43175 533 aaKnown RBP19.55■□□□□ 0.72
USP53-208ENST00000514305 C1orf105O95561 183 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 UQCRHP07919 91 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 MYZAPP0CAP1 466 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 HGFP14210 728 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 GCAP28676 217 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 SLCO1A2P46721 670 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 NR1D2Q14995 579 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 TSNAXIP1Q2TAA8 658 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 KRT71Q3SY84 523 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 PHF19Q5T6S3 580 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 PCSK4Q6UW60 755 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 XKR5Q6UX68 686 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 CYHR1Q6ZMK1 362 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 ZNF438Q7Z4V0 828 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 ZNF605Q86T29 641 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 ADAMTSL2Q86TH1 951 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 IQCKQ8N0W5 287 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 ZNF843Q8N446 348 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 VPS11Q9H270 941 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 TFB2MQ9H5Q4 396 aaKnown RBP19.55■□□□□ 0.72
USP53-208ENST00000514305 PARVBQ9HBI1 364 aa19.55■□□□□ 0.72
USP53-208ENST00000514305 AKAP7Q9P0M2 348 aaPredicted RBP19.55■□□□□ 0.72
USP53-208ENST00000514305 NOVA2Q9UNW9 492 aaKnown RBP19.55■□□□□ 0.72
USP53-208ENST00000514305 GFYI3L273 518 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 MATN2O00339 956 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 PPM1DO15297 605 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 DUX1O43812 170 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 CPNE6O95741 557 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 H2AFXP16104 143 aaPredicted RBP19.54■□□□□ 0.72
USP53-208ENST00000514305 ALDH4A1P30038 563 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 SHMT2P34897 504 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 ZFP36L1Q07352 338 aaKnown RBP19.54■□□□□ 0.72
USP53-208ENST00000514305 PRKAA1Q13131 559 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 ARMC6Q6NXE6 501 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 FRA10AC1Q70Z53 315 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 PIWIL4Q7Z3Z4 852 aaKnown RBP19.54■□□□□ 0.72
USP53-208ENST00000514305 CMC1Q7Z7K0 106 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 OR5AR1Q8NGP9 310 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 OR2W6PQ8NHA6 318 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 EPS8L3Q8TE67 593 aaKnown RBP19.54■□□□□ 0.72
USP53-208ENST00000514305 LCN9Q8WX39 176 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 HGH1Q9BTY7 390 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 SLC12A9Q9BXP2 914 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 ZMYND15Q9H091 742 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 ACBD3Q9H3P7 528 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 SENP1Q9P0U3 644 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 SPATA7Q9P0W8 599 aa19.54■□□□□ 0.72
USP53-208ENST00000514305 TSR3Q9UJK0 312 aaKnown RBP19.54■□□□□ 0.72
USP53-208ENST00000514305 HMX2A2RU54 273 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 AGRPO00253 132 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 BTN3A1O00481 513 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 NVLO15381 856 aaKnown RBP19.53■□□□□ 0.72
USP53-208ENST00000514305 RGS16O15492 202 aaPredicted RBP19.53■□□□□ 0.72
USP53-208ENST00000514305 KLHL2O95198 593 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 ALDOAP04075 364 aaKnown RBP19.53■□□□□ 0.72
USP53-208ENST00000514305 SLC35E2BP0CK96 405 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 AP1S2P56377 157 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 PRKG2Q13237 762 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 GPR18Q14330 331 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 CSHL1Q14406 222 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 ZNF460Q14592 562 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 CASP8Q14790 479 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 ARHGAP19Q14CB8 494 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 ACAP2Q15057 778 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 AMZ1Q400G9 498 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 OOSP2Q86WS3 158 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 OR9A1PQ8NGU1 263 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 STAG3L4Q8TBR4 150 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 ATL1Q8WXF7 558 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 UBXN10Q96LJ8 280 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 CCDC138Q96M89 665 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 SRMSQ9H3Y6 488 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 DCDC2Q9UHG0 476 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 LGALS13Q9UHV8 139 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 ACSL6Q9UKU0 697 aa19.53■□□□□ 0.72
USP53-208ENST00000514305 SYCE1LA8MT33 242 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 UBXN7O94888 489 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 GSTA1P08263 222 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 RBP1P09455 135 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 ITIH1P19827 911 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 MAGEA12P43365 314 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 CCT5P48643 541 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 MAPK10P53779 464 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 CEP85LQ5SZL2 805 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 DUS1LQ6P1R4 473 aaKnown RBP19.52■□□□□ 0.72
USP53-208ENST00000514305 TMEM207Q6UWW9 146 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 AMIGO1Q86WK6 493 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 SLITRK4Q8IW52 837 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 OR52E1Q8NGJ3 308 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 TTC9Q92623 222 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 SLC22A18Q96BI1 424 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 ZIM3Q96PE6 472 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 RDH14Q9HBH5 336 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 OR6C2Q9NZP2 312 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 RUVBL2Q9Y230 463 aaKnown RBP19.52■□□□□ 0.72
USP53-208ENST00000514305 NFS1Q9Y697 457 aa19.52■□□□□ 0.72
USP53-208ENST00000514305 WISP3O95389 354 aaPredicted RBP19.51■□□□□ 0.71
USP53-208ENST00000514305 TSPAN12O95859 305 aa19.51■□□□□ 0.71
USP53-208ENST00000514305 SYF2O95926 243 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms