RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ZW10O43264 779 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 ERLIN1O75477 346 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 SUPT3HO75486 399 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 TCEA3O75764 348 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 TUBBP07437 444 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 ADRB1P08588 477 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 LTA4HP09960 611 aaKnown RBP9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 ERGP11308 486 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 ST6GAL1P15907 406 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 KRT15P19012 456 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 ITIH1P19827 911 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 CDH3P22223 829 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 CNTFP26441 200 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 ETV5P41161 510 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 PNLIPRP1P54315 467 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 TBPL1P62380 186 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 ZNF844Q08AG5 666 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 KCNAB1Q14722 419 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 ZXDCQ2QGD7 858 aaPredicted RBP9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 DEFB110Q30KQ9 67 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 BEND6Q5SZJ8 279 aaPredicted RBP9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 CACHD1Q5VU97 1274 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 C16orf46Q6P387 395 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 KLHL35Q6PF15 583 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 WDR74Q6RFH5 385 aaPredicted RBP9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 ADAMTSL2Q86TH1 951 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 TMPRSS12Q86WS5 348 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 PLXDC1Q8IUK5 500 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 C4orf33Q8N1A6 199 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 OR4D9Q8NGE8 314 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 WDR48Q8TAF3 677 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 MAGEC3Q8TD91 643 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 ZFPM2Q8WW38 1151 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 PMEPA1Q969W9 287 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 ESAMQ96AP7 390 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 PYCR2Q96C36 320 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 MED8Q96G25 268 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 PDLIM5Q96HC4 596 aaKnown RBP9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 UBXN10Q96LJ8 280 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 OR2A14Q96R47 310 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 MIPEPQ99797 713 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 EGFL8Q99944 293 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 SCNM1Q9BWG6 230 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 EPB41L1Q9H4G0 881 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 PARVBQ9HBI1 364 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 OR6C2Q9NZP2 312 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 SPATA7Q9P0W8 599 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 XPR1Q9UBH6 696 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 FETUBQ9UGM5 382 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 TAC3Q9UHF0 121 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 WASF3Q9UPY6 502 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 SH2B3Q9UQQ2 575 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 OARD1Q9Y530 152 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 CACNA1AO00555 2505 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 FREM2Q5SZK8 3169 aa9.47□□□□□ -0.89
TOPBP1-209ENST00000513818 TLCD2A6NGC4 264 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 SLC9B1P1A6NJY1 282 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 C2orf74A8MZ97 194 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 TK2O00142 265 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 SLC16A5O15375 505 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 KDM1AO60341 852 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 CDH16O75309 829 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 C9P02748 559 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 MPOP05164 745 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 CCL4P13236 92 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 PRDX3P30048 256 aaKnown RBP9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 CCKBRP32239 447 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 KCNC1P48547 511 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 ATP6V0D1P61421 351 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 SH3BP2P78314 561 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 ZFP36L1Q07352 338 aaKnown RBP9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 ILF2Q12905 390 aaKnown RBP9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 SQSTM1Q13501 440 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 NAE1Q13564 534 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 TGFBIQ15582 683 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 CYP2A13Q16696 494 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 KRT71Q3SY84 523 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 TECRLQ5HYJ1 363 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 ANKS6Q68DC2 871 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 AGTRAPQ6RW13 159 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 SPESP1Q6UW49 350 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 CDHR3Q6ZTQ4 885 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 CLEC14AQ86T13 490 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 ISCA2Q86U28 154 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 FAM129CQ86XR2 697 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 TDRPQ86YL5 185 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 GPSM1Q86YR5 675 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 LRRC56Q8IYG6 542 aaPredicted RBP9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 GALNT15Q8N3T1 639 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 RAB42Q8N4Z0 105 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 FBXO15Q8NCQ5 510 aaPredicted RBP9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 MCOLN3Q8TDD5 553 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 MTBPQ96DY7 904 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 ZDHHC12Q96GR4 267 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 SCYL1Q96KG9 808 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 TMEM74Q96NL1 305 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 GPR78Q96P69 363 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 ATOH8Q96SQ7 321 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 TMEM79Q9BSE2 394 aa9.46□□□□□ -0.9
TOPBP1-209ENST00000513818 RAB11FIP5Q9BXF6 653 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms