RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 GRIA3P42263 894 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 BDKRB1P46663 353 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 TAP2Q03519 686 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 MGAT5Q09328 741 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 GPS2Q13227 327 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 CUL1Q13616 776 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 FASTKQ14296 549 aaKnown RBP9.35□□□□□ -0.91
RNF4-221ENST00000513643 WHAMMP3Q1A5X7 153 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 ZXDCQ2QGD7 858 aaPredicted RBP9.35□□□□□ -0.91
RNF4-221ENST00000513643 TTLL9Q3SXZ7 439 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 RBM20Q5T481 1227 aaKnown RBP9.35□□□□□ -0.91
RNF4-221ENST00000513643 PRAMEF17Q5VTA0 474 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 TMEM207Q6UWW9 146 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 SLC26A11Q86WA9 606 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 ZC3HC1Q86WB0 502 aaKnown RBP9.35□□□□□ -0.91
RNF4-221ENST00000513643 FAM20CQ8IXL6 584 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 MMGT1Q8N4V1 131 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 IL22RA1Q8N6P7 574 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 GSDMBQ8TAX9 411 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 PDLIM5Q96HC4 596 aaKnown RBP9.35□□□□□ -0.91
RNF4-221ENST00000513643 ELMO2Q96JJ3 720 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 C16orf45Q96MC5 204 aaPredicted RBP9.35□□□□□ -0.91
RNF4-221ENST00000513643 FOPNLQ96NB1 174 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 PKP4Q99569 1192 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 EFHD1Q9BUP0 239 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 SMYD2Q9NRG4 433 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 ZDHHC18Q9NUE0 388 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 PCMTD2Q9NV79 361 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 VWA7Q9Y334 891 aa9.35□□□□□ -0.91
RNF4-221ENST00000513643 IGKV1-8A0A0C4DH67 115 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 FITM1A5D6W6 292 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 ISM1B1AKI9 464 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 C21orf140B9A014 251 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 TMEM150CB9EJG8 249 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 MEN1O00255 615 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 SLC16A5O15375 505 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 NKX2-8O15522 239 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 CPNE3O75131 537 aaKnown RBP9.34□□□□□ -0.91
RNF4-221ENST00000513643 VPS26AO75436 327 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 SCRG1O75711 98 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 NTRK1P04629 796 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 MAGP20916 626 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 OAS2P29728 719 aaKnown RBP9.34□□□□□ -0.91
RNF4-221ENST00000513643 HSD17B2P37059 387 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 ARL4DP49703 201 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 GPX6P59796 221 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 YBX1P67809 324 aaKnown RBP9.34□□□□□ -0.91
RNF4-221ENST00000513643 CAV1Q03135 178 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 RELAQ04206 551 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 LCN10Q6JVE6 187 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 LRRC8EQ6NSJ5 796 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 UGT3A1Q6NUS8 523 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 FBXO42Q6P3S6 717 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 TTC23LQ6PF05 361 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 PAQR3Q6TCH7 311 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 PIWIL4Q7Z3Z4 852 aaKnown RBP9.34□□□□□ -0.91
RNF4-221ENST00000513643 ANKMY2Q8IV38 441 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 CPNE9Q8IYJ1 553 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 DSELQ8IZU8 1212 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 OR2L3Q8NG85 312 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 GABPB2Q8TAK5 448 aaPredicted RBP9.34□□□□□ -0.91
RNF4-221ENST00000513643 FBXO25Q8TCJ0 367 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 ZNF480Q8WV37 535 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 EEF1AKMT1Q8WVE0 214 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 ANKRD7Q92527 254 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 NDNQ99608 321 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 OLFM1Q99784 485 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 LRRC1Q9BTT6 524 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 GPR87Q9BY21 358 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 SPRTNQ9H040 489 aaPredicted RBP9.34□□□□□ -0.91
RNF4-221ENST00000513643 KLHL25Q9H0H3 589 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 CCDC68Q9H2F9 335 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 DPH5Q9H2P9 285 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 GPN2Q9H9Y4 310 aaPredicted RBP9.34□□□□□ -0.91
RNF4-221ENST00000513643 FAM114A2Q9NRY5 505 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 SOHLH2Q9NX45 425 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 TAS2R13Q9NYV9 303 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 CIDEBQ9UHD4 219 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 SERTAD3Q9UJW9 196 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 CROTQ9UKG9 612 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 SLC39A10Q9ULF5 831 aa9.34□□□□□ -0.91
RNF4-221ENST00000513643 OR2A25A4D2G3 310 aa9.33□□□□□ -0.92
RNF4-221ENST00000513643 FAM159BA6NKW6 160 aa9.33□□□□□ -0.92
RNF4-221ENST00000513643 ZNF891A8MT65 544 aaPredicted RBP9.33□□□□□ -0.92
RNF4-221ENST00000513643 CXorf49A8MYA2 514 aaPredicted RBP9.33□□□□□ -0.92
RNF4-221ENST00000513643 CTSVO60911 334 aa9.33□□□□□ -0.92
RNF4-221ENST00000513643 C1QL1O75973 258 aa9.33□□□□□ -0.92
RNF4-221ENST00000513643 SLC16A8O95907 504 aa9.33□□□□□ -0.92
RNF4-221ENST00000513643 CATP04040 527 aaKnown RBP9.33□□□□□ -0.92
RNF4-221ENST00000513643 GSTA2P09210 222 aa9.33□□□□□ -0.92
RNF4-221ENST00000513643 RAB40ALP0C0E4 278 aa9.33□□□□□ -0.92
RNF4-221ENST00000513643 CCNYL3P0C7X3 344 aa9.33□□□□□ -0.92
RNF4-221ENST00000513643 MCM3P25205 808 aa9.33□□□□□ -0.92
RNF4-221ENST00000513643 IMPA1P29218 277 aa9.33□□□□□ -0.92
RNF4-221ENST00000513643 SSTR1P30872 391 aa9.33□□□□□ -0.92
RNF4-221ENST00000513643 ITGA1P56199 1179 aa9.33□□□□□ -0.92
RNF4-221ENST00000513643 CYP4F2P78329 520 aa9.33□□□□□ -0.92
RNF4-221ENST00000513643 PRDX1Q06830 199 aaKnown RBP9.33□□□□□ -0.92
RNF4-221ENST00000513643 CKAP4Q07065 602 aaKnown RBP9.33□□□□□ -0.92
RNF4-221ENST00000513643 ILF2Q12905 390 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms