RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 FASTKQ14296 549 aaKnown RBP12.13□□□□□ -0.47
PDPN-210ENST00000513143 NR1D2Q14995 579 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 PLCL1Q15111 1095 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 PROX2Q3B8N5 592 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 PTCHD3Q3KNS1 767 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 AASDHQ4L235 1098 aaPredicted RBP12.13□□□□□ -0.47
PDPN-210ENST00000513143 FBXO48Q5FWF7 155 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 ZNF678Q5SXM1 525 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 ZNF761Q86XN6 746 aaPredicted RBP12.13□□□□□ -0.47
PDPN-210ENST00000513143 SYTL1Q8IYJ3 562 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 LINC01555Q8NAE3 123 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 PPFIBP2Q8ND30 876 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 OR4E2Q8NGC2 313 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 OR6Y1Q8NGX8 325 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 SREK1Q8WXA9 508 aaKnown RBP12.13□□□□□ -0.47
PDPN-210ENST00000513143 JPH3Q8WXH2 748 aaPredicted RBP12.13□□□□□ -0.47
PDPN-210ENST00000513143 SMPDL3AQ92484 453 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 ESAMQ96AP7 390 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 PHOX2BQ99453 314 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 GATA5Q9BWX5 397 aaPredicted RBP12.13□□□□□ -0.47
PDPN-210ENST00000513143 SGPP1Q9BX95 441 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 INTS7Q9NVH2 962 aaKnown RBP12.13□□□□□ -0.47
PDPN-210ENST00000513143 ASB1Q9Y576 335 aa12.13□□□□□ -0.47
PDPN-210ENST00000513143 SNRNP200O75643 2136 aaKnown RBP12.13□□□□□ -0.47
PDPN-210ENST00000513143 A0A1W2PPV9 198 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 EME2A4GXA9 379 aaPredicted RBP12.12□□□□□ -0.47
PDPN-210ENST00000513143 LRRC14BA6NHZ5 514 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 C4orf47A7E2U8 309 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 K7EPI3 171 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 E2F3O00716 465 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 PRICKLE3O43900 615 aaPredicted RBP12.12□□□□□ -0.47
PDPN-210ENST00000513143 CKMT1AP12532 417 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 MYF5P13349 255 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 PNLIPP16233 465 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 CCND1P24385 295 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 GDF5P43026 501 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 EPHA4P54764 986 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 NAA20P61599 178 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 TBPL1P62380 186 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 PDK4Q16654 411 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 UNC50Q53HI1 259 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 CAPN13Q6MZZ7 669 aaPredicted RBP12.12□□□□□ -0.47
PDPN-210ENST00000513143 ASCL5Q7RTU5 278 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 LRRC70Q7Z2Q7 622 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 TRIM42Q8IWZ5 723 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 ADGRF3Q8IZF5 1079 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 LMNTD1Q8N9Z9 388 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 RAB3IL1Q8TBN0 382 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 ZNF483Q8TF39 744 aaPredicted RBP12.12□□□□□ -0.47
PDPN-210ENST00000513143 SETD7Q8WTS6 366 aaKnown RBP12.12□□□□□ -0.47
PDPN-210ENST00000513143 CKAP2Q8WWK9 683 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 PYCR2Q96C36 320 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 SLC38A3Q99624 504 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 TBC1D10AQ9BXI6 508 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 PITPNM3Q9BZ71 974 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 SLC32A1Q9H598 525 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 CCDC177Q9NQR7 707 aaPredicted RBP12.12□□□□□ -0.47
PDPN-210ENST00000513143 PCTPQ9UKL6 214 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 HEATR5BQ9P2D3 2071 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 UNC13CQ8NB66 2214 aa12.12□□□□□ -0.47
PDPN-210ENST00000513143 OR6C74A6NCV1 312 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 BTN3A3O00478 584 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 CCNT2O60583 730 aaKnown RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 H2AFYO75367 372 aaKnown RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 SUPT7LO94864 414 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 UBXN7O94888 489 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 WDR47O94967 919 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 SERPINE1P05121 402 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 CHRM5P08912 532 aaPredicted RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 NEFHP12036 1026 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 BGNP21810 368 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 GRK2P25098 689 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 MDH1P40925 334 aaKnown RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 DUSP3P51452 185 aaPredicted RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 CHI3L2Q15782 390 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 GUSBP11Q6P575 273 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 SUSD1Q6UWL2 747 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 ZCCHC23Q6ZST2 131 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 FRMD7Q6ZUT3 714 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 TAX1BP1Q86VP1 789 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 THOC6Q86W42 341 aaKnown RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 C2orf73Q8N5S3 287 aaPredicted RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 CCNYL1Q8N7R7 359 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 RHBDD1Q8TEB9 315 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 DYDC1Q8WWB3 177 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 NAT6Q93015 286 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 MOCOSQ96EN8 888 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 MED8Q96G25 268 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 CNDP1Q96KN2 507 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 OR4K3Q96R72 315 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 MIPEPQ99797 713 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 PCBD2Q9H0N5 130 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 GSTO2Q9H4Y5 243 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 ZBTB26Q9HCK0 441 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 EVA1BQ9NVM1 165 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 OPTCQ9UBM4 332 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 SLC22A14Q9Y267 594 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 PIPSLA2A3N6 862 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 OR5K3A6NET4 321 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 KLF11O14901 512 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms