RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 COQ3Q9NZJ6 369 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 PPP2R2CQ9Y2T4 447 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 L3MBTL1Q9Y468 752 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 SPO11Q9Y5K1 396 aa8.72□□□□□ -1.01
NUP54-211ENST00000512151 ZANQ9Y493 2812 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 FAM237BA0A1B0GVD1 139 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 RNF212BA8MTL3 300 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 ASNA1O43681 348 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 KLK8O60259 260 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 BMP10O95393 424 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 SERPINA7P05543 415 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 TPOP07202 933 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 UGT2B7P16662 529 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 NDUFS1P28331 727 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 CD86P42081 329 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 OR1D4P47884 311 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 ALDH6A1Q02252 535 aaKnown RBP8.71□□□□□ -1.02
NUP54-211ENST00000512151 KLC1Q07866 573 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 SNTB1Q13884 538 aaKnown RBP8.71□□□□□ -1.02
NUP54-211ENST00000512151 DEFB113Q30KQ7 82 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 DCUN1D2Q6PH85 259 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 DET1Q7L5Y6 550 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 KIAA1328Q86T90 577 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 CDC20BQ86Y33 519 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 ZZZ3Q8IYH5 903 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 TAB3Q8N5C8 712 aaPredicted RBP8.71□□□□□ -1.02
NUP54-211ENST00000512151 OR52E1Q8NGJ3 308 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 OR2A14Q96R47 310 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 CRB3Q9BUF7 120 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 CLEC4MQ9H2X3 399 aaPredicted RBP8.71□□□□□ -1.02
NUP54-211ENST00000512151 ZNF395Q9H8N7 513 aaPredicted RBP8.71□□□□□ -1.02
NUP54-211ENST00000512151 RASSF1Q9NS23 344 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 SPHK1Q9NYA1 384 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 IL17CQ9P0M4 197 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 CTTNBP2NLQ9P2B4 639 aa8.71□□□□□ -1.02
NUP54-211ENST00000512151 DNMT3AQ9Y6K1 912 aaPredicted RBP8.71□□□□□ -1.02
NUP54-211ENST00000512151 SONP18583 2426 aaKnown RBP8.7□□□□□ -1.02
NUP54-211ENST00000512151 NSG1A0A0A6YYJ2 146 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 A0A0A6YYK5 440 aaPredicted RBP8.7□□□□□ -1.02
NUP54-211ENST00000512151 A0A1B0GX78 115 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 ASPDHA6ND91 283 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 MGAT4DA6NG13 374 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 BTNL10A8MVZ5 291 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 C2orf74A8MZ97 194 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 H3BRJ5 948 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 MAP2K7O14733 419 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 SGTAO43765 313 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 MFSD11O43934 449 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 ATE1O95260 518 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 MED26O95402 600 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 TSPAN12O95859 305 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 CCDC175P0C221 793 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 SLC35G4P0C7Q5 338 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 CA4P22748 312 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 CES1P23141 567 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 MCM3P25205 808 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 NSG1P42857 185 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 HADHBP55084 474 aaKnown RBP8.7□□□□□ -1.02
NUP54-211ENST00000512151 EEF1A2Q05639 463 aaKnown RBP8.7□□□□□ -1.02
NUP54-211ENST00000512151 KRT33BQ14525 404 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 ATP13A4Q4VNC1 1196 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 TFDP3Q5H9I0 405 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 RNFT1Q5M7Z0 435 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 FNBP1LQ5T0N5 605 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 PAMR1Q6UXH9 720 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 ZNF662Q6ZS27 426 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 NEK10Q6ZWH5 1172 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 CHSY3Q70JA7 882 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 NDUFAF7Q7L592 441 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 CAMKMTQ7Z624 323 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 C17orf53Q8N3J3 647 aaPredicted RBP8.7□□□□□ -1.02
NUP54-211ENST00000512151 PHC3Q8NDX5 983 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 SUN3Q8TAQ9 357 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 BRSK1Q8TDC3 778 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 ASB5Q8WWX0 329 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 COX4I2Q96KJ9 171 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 FRMD6Q96NE9 622 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 TTC25Q96NG3 672 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 SIGLEC12Q96PQ1 595 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 FERD3LQ96RJ6 166 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 GPR63Q9BZJ6 419 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 CHRNA10Q9GZZ6 450 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 GOLPH3Q9H4A6 298 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 TFB2MQ9H5Q4 396 aaKnown RBP8.7□□□□□ -1.02
NUP54-211ENST00000512151 ZWILCHQ9H900 591 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 MAGEE1Q9HCI5 957 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 MRPL47Q9HD33 250 aaKnown RBP8.7□□□□□ -1.02
NUP54-211ENST00000512151 IL26Q9NPH9 171 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 KCNJ16Q9NPI9 418 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 RAD18Q9NS91 495 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 IRAK4Q9NWZ3 460 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 TRMT1Q9NXH9 659 aaKnown RBP8.7□□□□□ -1.02
NUP54-211ENST00000512151 UVRAGQ9P2Y5 699 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 ANAPC7Q9UJX3 599 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 ACSL5Q9ULC5 683 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 KLHL20Q9Y2M5 609 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 SCINQ9Y6U3 715 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 MAU2Q9Y6X3 613 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 COLEC10Q9Y6Z7 277 aa8.7□□□□□ -1.02
NUP54-211ENST00000512151 GAPDHSO14556 408 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms