RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 PNMA1Q8ND90 353 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SIMC1Q8NDZ2 872 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR5T3Q8NGG3 340 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 NEK7Q8TDX7 302 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 STYXQ8WUJ0 223 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 BPIFA2Q96DR5 249 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZHX1-C8orf76Q96EF9 292 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SAAL1Q96ER3 474 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 KIF12Q96FN5 646 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM169Q96HH4 297 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPP1R16AQ96I34 528 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TAAR9Q96RI9 348 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PIGSQ96S52 555 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TSC22D3Q99576 134 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MECRQ9BV79 373 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PITPNM3Q9BZ71 974 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 NT5C3AQ9H0P0 336 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCNN2Q9H2S1 579 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RIBC2Q9H4K1 309 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TBC1D22BQ9NU19 505 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAB20Q9NX57 234 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RDH8Q9NYR8 311 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 USE1Q9NZ43 259 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PIPOXQ9P0Z9 390 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 IGSF9Q9P2J2 1179 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 KLQ9UEF7 1012 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CLEC4AQ9UMR7 237 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SNX7Q9UNH6 387 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM5Q9Y2B1 443 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDHB3Q9Y5E6 796 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDHGA3Q9Y5H0 932 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SORL1Q92673 2214 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 A0A1W2PP18 115 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CLCA1A8K7I4 914 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SOCS2O14508 198 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CASKO14936 926 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC7A4O43246 635 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 AVILO75366 819 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ACTL6BO94805 426 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GGPS1O95749 300 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 NDUFB10O96000 172 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RPSAP08865 295 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 POLR2MP0CAP2 368 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 STAG3L1P0CL83 205 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF23P17027 643 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ADCYAP1P18509 176 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATP5F1P24539 256 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 NMT1P30419 496 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RPL22P35268 128 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 STAT1P42224 750 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 FLT3LGP49771 235 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF81P51508 661 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ALDH3A2P51648 485 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 THOP1P52888 689 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCBP3P57721 371 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARF3P61204 181 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 STXBP1P61764 594 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPP2R2AP63151 447 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARF1P84077 181 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TFAP4Q01664 338 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 FASTKQ14296 549 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SMCO1Q147U7 214 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 NCF4Q15080 339 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 NOMO1Q15155 1222 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 DPYSL2Q16555 572 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 DGKDQ16760 1214 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RTN1Q16799 776 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 UGP2Q16851 508 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MUM1Q2TAK8 710 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MGAT5BQ3V5L5 792 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCNYL2Q5T2Q4 361 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MFSD14CQ5VZR4 134 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CARD17Q5XLA6 110 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 EGFLAMQ63HQ2 1017 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCTD16Q68DU8 428 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAHD1Q6P587 224 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPESP1Q6UW49 350 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPR135Q8IZ08 494 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RGL4Q8IZJ4 473 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GHDCQ8N2G8 530 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 Q8N402 240 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC33Q8N5R6 958 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF655Q8N720 491 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GALNT6Q8NCL4 622 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCNYQ8ND76 341 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 WDR36Q8NI36 951 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 URGCPQ8TCY9 931 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRRN4Q8WUT4 740 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CASP10Q92851 521 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 KIAA1143Q96AT1 154 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 OTULINQ96BN8 352 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPRASP2Q96D09 838 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC10A4Q96EP9 437 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPP1R2P1Q96PQ5 205 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR2A14Q96R47 310 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PDCD2LQ9BRP1 358 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 BOCQ9BWV1 1114 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 BBS2Q9BXC9 721 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPR63Q9BZJ6 419 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms