RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 HEXDCQ8WVB3 486 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 QKIQ96PU8 341 aaKnown RBP eCLIP18.15■□□□□ 0.51e-11■■■□□ 14.7
HMGCS1-206ENST00000511774 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 GBA3Q9H227 469 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 MCCC2Q9HCC0 563 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 ENAMQ9NRM1 1142 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 C3orf18Q9UK00 162 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 MRPS2Q9Y399 296 aaKnown RBP18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 INTS1Q8N201 2190 aaKnown RBP18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 SCN2AQ99250 2005 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 SLC5A10A0PJK1 596 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 FITM1A5D6W6 292 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 CTSVO60911 334 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 AP2A1O95782 977 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 ARHGAP25P42331 645 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 EFNA3P52797 238 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 ZBED6P86452 979 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.14■□□□□ 0.493e-9■■□□□ 13.4
HMGCS1-206ENST00000511774 FIGLAQ6QHK4 219 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 TAX1BP1Q86VP1 789 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 CEP97Q8IW35 865 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 MMP21Q8N119 569 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 DNAJB8Q8NHS0 232 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 CCDC110Q8TBZ0 833 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 IL17FQ96PD4 163 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 TMEM121Q9BTD3 319 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 ENKD1Q9H0I2 346 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 VPS37BQ9H9H4 285 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 POLG2Q9UHN1 485 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 ZNF835Q9Y2P0 537 aa18.14■□□□□ 0.49
HMGCS1-206ENST00000511774 NSG1A0A0A6YYJ2 146 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 FFAR3O14843 346 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 LIN7AO14910 233 aaPredicted RBP18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 GPR42O15529 346 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 CRYABP02511 175 aaKnown RBP18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 SERPINA7P05543 415 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 ITGAMP11215 1152 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 NSG1P42857 185 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 GEMP55040 296 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 EEF1A2Q05639 463 aaKnown RBP18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 GRB7Q14451 532 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 GRM7Q14831 915 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 GPR33Q49SQ1 333 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 LRRC38Q5VT99 294 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 FRMPD2BQ6IN97 320 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 HIBCHQ6NVY1 386 aaPredicted RBP18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 ZNF449Q6P9G9 518 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 NDUFAF7Q7L592 441 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 VAT1Q99536 393 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 SPOCK3Q9BQ16 436 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 TREX2Q9BQ50 279 aaPredicted RBP18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 LCMT1Q9UIC8 334 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 CAPN11Q9UMQ6 739 aa18.13■□□□□ 0.49
HMGCS1-206ENST00000511774 FLNAP21333 2647 aaKnown RBP18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 A0A1W2PQ72 361 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 BMP10O95393 424 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 GYPCP04921 128 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 TMEM253P0C7T8 217 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 PSMB4P28070 264 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 RBL1P28749 1068 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 CARSP49589 748 aaKnown RBP18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 VSX2P58304 361 aaPredicted RBP18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 CSNK1G2P78368 415 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 SPARCL1Q14515 664 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 ASTE1Q2TB18 679 aaPredicted RBP18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 FAAH2Q6GMR7 532 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 BZW1Q7L1Q6 419 aaKnown RBP18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 TAS2R42Q7RTR8 314 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 ELMO1Q92556 727 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 MIEF2Q96C03 454 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 SELENOSQ9BQE4 189 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 BPIFA3Q9BQP9 254 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 ZNF304Q9HCX3 659 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 MEMO1Q9Y316 297 aa18.12■□□□□ 0.49
HMGCS1-206ENST00000511774 VPS13CQ709C8 3753 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 ABCA4P78363 2273 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 IGLV3-12A0A075B6K2 115 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 LOC105369274A0A096LPK9 316 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 IGHV1-45A0A0A0MS14 117 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 LOC102723532A0A0G2JNH3 316 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 PRAMEF2O60811 474 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 NADKO95544 446 aaPredicted RBP18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 CRTAMO95727 393 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 ESRRAP11474 423 aaPredicted RBP18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 ST13P50502 369 aaKnown RBP18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 SMSP52788 366 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 SLC18A3Q16572 532 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 TFDP3Q5H9I0 405 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 WASHC2DQ5SRD0 308 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 YOD1Q5VVQ6 348 aaPredicted RBP18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 Q6ZPB1 254 aaPredicted RBP18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 CLEC17AQ6ZS10 378 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 VRK3Q8IV63 474 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 OR4N4Q8N0Y3 316 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 CHTF18Q8WVB6 975 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 VPS50Q96JG6 964 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 C10orf90Q96M02 699 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 TSPAN10Q9H1Z9 355 aaPredicted RBP18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 SMARCAL1Q9NZC9 954 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 TRHDEQ9UKU6 1024 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms