RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	DSC2	Q02487	901 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	PTP4A2	Q12974	167 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	PNOC	Q13519	176 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	GTF2H3	Q13889	308 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	DAZAP2	Q15038	168 aa	Predicted RBP	9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	FLYWCH1	Q4VC44	716 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	EMC4	Q5J8M3	183 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	SPESP1	Q6UW49	350 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	CAPN12	Q6ZSI9	719 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	GALNTL5	Q7Z4T8	443 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	LIX1L	Q8IVB5	337 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	PRSS58	Q8IYP2	241 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	ADGRF3	Q8IZF5	1079 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	DNAJC22	Q8N4W6	341 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	ACVR1C	Q8NER5	493 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	SLC30A5	Q8TAD4	765 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	DLG3	Q92796	817 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	TMEM125	Q96AQ2	219 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	VPS35	Q96QK1	796 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	SECISBP2	Q96T21	854 aa	Known RBP	9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	TP63	Q9H3D4	680 aa	Predicted RBP	9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	DHX35	Q9H5Z1	703 aa	Known RBP	9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	PCDH9	Q9HC56	1237 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	ACTR10	Q9NZ32	417 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	C3orf18	Q9UK00	162 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	RPL26L1	Q9UNX3	145 aa	Known RBP	9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	AP4E1	Q9UPM8	1137 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	MGAM2	Q2M2H8	2515 aa		9.09	□□□□□ -0.95
PTPN20-223	ENST00000509900	OR2AG2	A6NM03	316 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	POM121C	A8CG34	1229 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	C2orf74	A8MZ97	194 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	ANKRD66	B4E2M5	251 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	SPRY1	O43609	319 aa	Predicted RBP	9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	ZNF24	P17028	368 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	NDUFS1	P28331	727 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	ZNF143	P52747	638 aa	Predicted RBP	9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	KRT85	P78386	507 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	ITK	Q08881	620 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	TUBA3C	Q13748	450 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	DPYS	Q14117	519 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	ATP13A5	Q4VNC0	1218 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	ALG1L	Q6GMV1	187 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	ACAD10	Q6JQN1	1059 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	TIGD7	Q6NT04	549 aa	Predicted RBP	9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	TUBA3E	Q6PEY2	450 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	GBP6	Q6ZN66	633 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	C20orf204	Q6ZNR8	217 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	NLRP9	Q7RTR0	991 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	MCAT	Q8IVS2	390 aa	Known RBP	9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	BEST3	Q8N1M1	668 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	METTL27	Q8N6F8	245 aa	Predicted RBP	9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	TEX26	Q8N6G2	289 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	STT3B	Q8TCJ2	826 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	FAM222B	Q8WU58	562 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	TUBGCP2	Q9BSJ2	902 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	RMND1	Q9NWS8	449 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	ADGRE2	Q9UHX3	823 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	PLCL2	Q9UPR0	1127 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900	COLEC10	Q9Y6Z7	277 aa		9.08	□□□□□ -0.96
PTPN20-223	ENST00000509900		A0A1W2PPR1	153 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	PSMA7	O14818	248 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	SLC4A1	P02730	911 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	CYP1A1	P04798	512 aa	Predicted RBP	9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	ZGLP1	P0C6A0	271 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	UGT2B7	P16662	529 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	BMP7	P18075	431 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	CD96	P40200	585 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	ARSF	P54793	590 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	CDH6	P55285	790 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	OR1C1	Q15619	314 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	EXOC3L4	Q17RC7	722 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	FCRLB	Q6BAA4	426 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	SPINK14	Q6IE38	97 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	TMEM220	Q6QAJ8	160 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	PRSS57	Q6UWY2	283 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	ACAD11	Q709F0	780 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	YTHDF3	Q7Z739	585 aa	Known RBP	9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	LRRC75A-AS1	Q8N1F1	130 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	FLVCR1-AS1	Q8TAF5	88 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	GDAP1	Q8TB36	358 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	ARRDC2	Q8TBH0	407 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	ZNF653	Q96CK0	615 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	DHTKD1	Q96HY7	919 aa	Predicted RBP	9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	OR2A14	Q96R47	310 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	PEBP4	Q96S96	227 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	SNRNP25	Q9BV90	132 aa	Known RBP	9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	C19orf24	Q9BVV8	132 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	POLR1E	Q9GZS1	481 aa	Known RBP	9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	XKR8	Q9H6D3	395 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	CUTC	Q9NTM9	273 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	ETNK2	Q9NVF9	386 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	RIC8B	Q9NVN3	520 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	ANKRD10	Q9NXR5	420 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	EURL	Q9NYK6	297 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	CWC15	Q9P013	229 aa	Known RBP	9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	FAM8A1	Q9UBU6	413 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	SHOC2	Q9UQ13	582 aa		9.07	□□□□□ -0.96
PTPN20-223	ENST00000509900	MAU2	Q9Y6X3	613 aa		9.07	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms