RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 FNBP1Q96RU3 617 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 RBM4BQ9BQ04 359 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 CHCHD6Q9BRQ6 235 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 BTBD10Q9BSF8 475 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 SDR39U1Q9NRG7 319 aaPredicted RBP4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 SMAD5-AS1Q9Y6J3 95 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 MYOM1P52179 1685 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 NRXN3Q9Y4C0 1643 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 ARHGEF5Q12774 1597 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 EHBP1L1Q8N3D4 1523 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 PXDNQ92626 1479 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 RREB1Q92766 1687 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 ZNF541Q9H0D2 1346 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 TMEM131LA2VDJ0 1609 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 OR2A25A4D2G3 310 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 XRCC3O43542 346 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 OR10H2O60403 315 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 DOK2O60496 412 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 SP100P23497 879 aaPredicted RBP4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 RXRGP48443 463 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 ARSEP51690 589 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 XKR6Q5GH73 641 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 TMCO3Q6UWJ1 677 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 SPEM1Q8N4L4 309 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 DYRK2Q92630 601 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 EVI5LQ96CN4 794 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 NEK1Q96PY6 1258 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 P2RY12Q9H244 342 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 TUBE1Q9UJT0 475 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 RGPD1P0DJD0 1748 aa4.55□□□□□ -1.68
TOPBP1-206ENST00000508524 GCC2Q8IWJ2 1684 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 METP08581 1390 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 MSGN1A6NI15 193 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 B4DLN1 442 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 KLF11O14901 512 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 MOCS3O95396 460 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 WDPCPO95876 746 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 VPREB1P12018 145 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 CA6P23280 308 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 SLC6A6P31641 620 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 MRPL12P52815 198 aaKnown RBP4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 CDK3Q00526 305 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 NR1D2Q14995 579 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 DUSP28Q4G0W2 176 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 PLEKHS1Q5SXH7 462 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 METTL7BQ6UX53 244 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 OR5M8Q8NGP6 311 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 SUSD6Q92537 303 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 IWS1Q96ST2 819 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 LMF2Q9BU23 707 aaKnown RBP4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 FNDC11Q9BVV2 318 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 UBXN6Q9BZV1 441 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 SYNCQ9H7C4 482 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 ARHGEF38Q9NXL2 777 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 ZHX1Q9UKY1 873 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 USP32Q8NFA0 1604 aa4.54□□□□□ -1.68
TOPBP1-206ENST00000508524 PIK3R4Q99570 1358 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 ITIH6Q6UXX5 1313 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 LMTK2Q8IWU2 1503 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 IGLV7-46A0A075B6I9 117 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 RNASEH1O60930 286 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 ZBED4O75132 1171 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 MED24O75448 989 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 ZWINTO95229 277 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 PAX3P23760 479 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 GABRA5P31644 462 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 PDX1P52945 283 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 DSCR10P59022 87 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 KLHL26Q53HC5 615 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 IL27RAQ6UWB1 636 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 SZRD1Q7Z422 152 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 CEP57Q86XR8 500 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 LSMEM2Q8N112 164 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 MARVELD2Q8N4S9 558 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 BMPERQ8N8U9 685 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 IRGQQ8WZA9 623 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 FAM120BQ96EK7 910 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 MAGED4Q96JG8 741 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 PAFAH2Q99487 392 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 SYT15Q9BQS2 421 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 TRIM51Q9BSJ1 452 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 FGFBP2Q9BYJ0 223 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 S1PR5Q9H228 398 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 ATP13A3Q9H7F0 1226 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 GRIP1Q9Y3R0 1128 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 PLCH1Q4KWH8 1693 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 EEA1Q15075 1411 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 CEP162Q5TB80 1403 aa4.53□□□□□ -1.68
TOPBP1-206ENST00000508524 CASZ1Q86V15 1759 aa4.53□□□□□ -1.69
TOPBP1-206ENST00000508524 THSD7AQ9UPZ6 1657 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 A0A1W2PQ09 198 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 CTDSP2O14595 271 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 PRAMEF11O60813 436 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 ZNF10P21506 573 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 MC1RQ01726 317 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 CREB5Q02930 508 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 KRT79Q5XKE5 535 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 DHRS7BQ6IAN0 325 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 TEX38Q6PEX7 206 aa4.52□□□□□ -1.69
TOPBP1-206ENST00000508524 TMPRSS11FQ6ZWK6 438 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms