RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 SUPT20HL2P0C7V6 817 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 NMBRP28336 390 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 SNRPEP62304 92 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 MZT1Q08AG7 82 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 TUBB2AQ13885 445 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 TAZQ16635 292 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 TTC31Q49AM3 519 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 GLRA4Q5JXX5 417 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 CCDC158Q5M9N0 1113 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 PACS1Q6VY07 963 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 C15orf39Q6ZRI6 1047 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 CNPY4Q8N129 248 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 SLC5A8Q8N695 610 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 EXD1Q8NHP7 514 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 RSPH1Q8WYR4 309 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 ROBO4Q8WZ75 1007 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 MR1Q95460 341 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 CABS1Q96KC9 395 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 RMDN2Q96LZ7 410 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 MS4A10Q96PG2 267 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 SEPHS2Q99611 448 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 TUBB2BQ9BVA1 445 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 UTP14AQ9BVJ6 771 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 WDR13Q9H1Z4 485 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 ANKZF1Q9H8Y5 726 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 ZBTB20Q9HC78 741 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 CHCHD3Q9NX63 227 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 SEPT10Q9P0V9 454 aa3.87□□□□□ -1.79
TRAPPC13-209ENST00000508304 A0A1W2PPI3 338 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 TMEM178BH3BS89 294 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 DNM1LO00429 736 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 RTCAO00442 366 aaKnown RBP3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 NDUFS4O43181 175 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 CIDEAO60543 219 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 CRCPO75575 148 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 P4HA1P13674 534 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 GABRA5P31644 462 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 MTHFRP42898 656 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 CRKLP46109 303 aaKnown RBP3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 NR2C2P49116 596 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 CTSCP53634 463 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 ACSM1Q08AH1 577 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 TEFQ10587 303 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 CBX3Q13185 183 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 KIR2DS3Q14952 304 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 ANKRD20A4Q4UJ75 823 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 ANKRD20A8PQ5CZ79 823 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 WDR38Q5JTN6 314 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 ANKRD20A2Q5SQ80 823 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 ANKRD20A1Q5TYW2 823 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 ANKRD20A3Q5VUR7 823 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 CNSTQ6PJW8 725 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 BTN2A1Q7KYR7 527 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 CEP57Q86XR8 500 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 PM20D2Q8IYS1 436 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 NAT8LQ8N9F0 302 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 ATAD1Q8NBU5 361 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 TBC1D16Q8TBP0 767 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 WDR20Q8TBZ3 569 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 PTP4A1Q93096 173 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 ERO1AQ96HE7 468 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 OXNAD1Q96HP4 312 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 DACH2Q96NX9 599 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 NEK1Q96PY6 1258 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 INTS14Q96SY0 518 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 GTPBP2Q9BX10 602 aaKnown RBP3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 SLC5A7Q9GZV3 580 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 TRPV4Q9HBA0 871 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 IL1RAPL2Q9NP60 686 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 DPP3Q9NY33 737 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 AKAP7Q9P0M2 348 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 VPS18Q9P253 973 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 CPSF3Q9UKF6 684 aaKnown RBP3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 SNX7Q9UNH6 387 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 C2CD2Q9Y426 696 aa3.86□□□□□ -1.79
TRAPPC13-209ENST00000508304 ARHGEF40Q8TER5 1519 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 ENO4A6NNW6 628 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 IFIT3O14879 490 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 SSX4O60224 188 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 PNPP00491 289 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 NR3C1P04150 777 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 KRT19P08727 400 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 GNB3P16520 340 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 PLA2G7Q13093 441 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 RRS1Q15050 365 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 TECRLQ5HYJ1 363 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 SHEQ5VZ18 495 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 TEX38Q6PEX7 206 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 GBP6Q6ZN66 633 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 LINC00696Q6ZRV3 163 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 TPRG1Q6ZUI0 275 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 PIWIL4Q7Z3Z4 852 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 C4orf19Q8IY42 314 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 GBGT1Q8N5D6 347 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 NHLRC2Q8NBF2 726 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 FIBINQ8TAL6 211 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 EXT2Q93063 718 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 SLAMF9Q96A28 289 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 SPSB1Q96BD6 273 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms