RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, human

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-208	ENST00000506971	SPATA19	Q7Z5L4	167 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CTAGE6	Q86UF2	777 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CTAGE4	Q8IX94	777 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	GUF1	Q8N442	669 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	PLD5	Q8N7P1	536 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	C11orf65	Q8NCR3	313 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	TRIM58	Q8NG06	486 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	BRSK1	Q8TDC3	778 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	NELFB	Q8WX92	580 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CNOT9	Q92600	299 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	P2RX5	Q93086	422 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	URB1-AS1	Q96HZ7	61 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	EPSTI1	Q96J88	318 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	FAM111A	Q96PZ2	611 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	ALS2CR12	Q96Q35	445 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	ERGIC2	Q96RQ1	377 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	TXN2	Q99757	166 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	TSG101	Q99816	390 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	WDR77	Q9BQA1	342 aa	Predicted RBP	4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	NUP85	Q9BW27	656 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	IFT27	Q9BW83	186 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	FAM129A	Q9BZQ8	928 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CTDSP1	Q9GZU7	261 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	SAMSN1	Q9NSI8	373 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	EXOC1	Q9NV70	894 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CHCHD3	Q9NX63	227 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	RNF14	Q9UBS8	474 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	INTS6	Q9UL03	887 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	MKLN1	Q9UL63	735 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	STX8	Q9UNK0	236 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	EXOC7	Q9UPT5	735 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CHKB	Q9Y259	395 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	DTX4	Q9Y2E6	619 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	NFS1	Q9Y697	457 aa		4.24	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	SLX4	Q8IY92	1834 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	LOC102723996	A0A087X1L8	192 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	HTR3E	A5X5Y0	456 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CCDC169	A6NNP5	214 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	KLRF2	D3W0D1	207 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	AP3B1	O00203	1094 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CACNB4	O00305	520 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	SLC33A1	O00400	549 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	ADAMDEC1	O15204	470 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	SPRY3	O43610	288 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	DIAPH2	O60879	1101 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	PEX11A	O75192	247 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	AVIL	O75366	819 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	PRDM1	O75626	825 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CHRM4	P08173	479 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	INHBA	P08476	426 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	PNMA6A	P0CW24	399 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	PKM	P14618	531 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	HOXB9	P17482	250 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	TCP1	P17987	556 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	IGFBP2	P18065	325 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	TRIM21	P19474	475 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	AGA	P20933	346 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CASP14	P31944	242 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	MC5R	P33032	325 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	KHK	P50053	298 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	HNMT	P50135	292 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	FKBP1A	P62942	108 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	DYNLL1	P63167	89 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	ASIC1	P78348	528 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	KCNJ10	P78508	379 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CDK18	Q07002	472 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	KIF5A	Q12840	1032 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	ALKBH1	Q13686	389 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	ZNF273	Q14593	569 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	INA	Q16352	499 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	ZNF667	Q5HYK9	610 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	KLHL10	Q6JEL2	608 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	RGS9BP	Q6ZS82	235 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	OTUD6A	Q7L8S5	288 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	ZNF367	Q7RTV3	350 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CNTN4	Q8IWV2	1026 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	RNF10	Q8N5U6	811 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CSGALNACT2	Q8N6G5	542 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	C4orf32	Q8N8J7	132 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CAMKV	Q8NCB2	501 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CCDC110	Q8TBZ0	833 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	FAM216A	Q8WUB2	273 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	SLC13A3	Q8WWT9	602 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	SYN2	Q92777	582 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CNDP1	Q96KN2	507 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	GFM1	Q96RP9	751 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	RUFY1	Q96T51	708 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	PAFAH2	Q99487	392 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	TMEM47	Q9BQJ4	181 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	CARD6	Q9BX69	1037 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	NPL	Q9BXD5	320 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	TRIM9	Q9C026	710 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	TRIM7	Q9C029	511 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	COA1	Q9GZY4	146 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	VPS37B	Q9H9H4	285 aa		4.23	□□□□□ -1.73
CALCOCO2-208	ENST00000506971	IL1RAPL1	Q9NZN1	696 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms