RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ZNF578Q96N58 590 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 NDNQ99608 321 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 OLFM1Q99784 485 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 C17orf62Q9BQA9 187 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 DPH2Q9BQC3 489 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 SGPP1Q9BX95 441 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 POLR1BQ9H9Y6 1135 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 CLK4Q9HAZ1 481 aaKnown RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 SNX15Q9NRS6 342 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 EURLQ9NYK6 297 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 NUDT4Q9NZJ9 180 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 SNX7Q9UNH6 387 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 ICKQ9UPZ9 632 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 MTO1Q9Y2Z2 717 aaKnown RBP8.19□□□□□ -1.1
PDGFC-205ENST00000506880 AP1M2Q9Y6Q5 423 aa8.19□□□□□ -1.1
PDGFC-205ENST00000506880 KCNE1BA0A087WTH5 132 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 A0A096LPK6 155 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 IGHV5-10-1A0A0J9YXX1 117 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 SPAARA0A1B0GVQ0 90 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 SYNDIG1LA6NDD5 238 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 GOLGA6L10A6NI86 522 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 E7ENX8 843 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 STX16-NPEPL1H3BU86 382 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 STX16O14662 325 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 PLD2O14939 933 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 CAPN5O15484 640 aaPredicted RBP8.18□□□□□ -1.1
PDGFC-205ENST00000506880 KLK8O60259 260 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 GLRA3O75311 464 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 CSO75390 466 aaKnown RBP8.18□□□□□ -1.1
PDGFC-205ENST00000506880 KATNA1O75449 491 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 SLC16A8O95907 504 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 TPBGLP0DKB5 382 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 MYBL2P10244 700 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 EZRP15311 586 aaKnown RBP8.18□□□□□ -1.1
PDGFC-205ENST00000506880 CD1DP15813 335 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 PRDX3P30048 256 aaKnown RBP8.18□□□□□ -1.1
PDGFC-205ENST00000506880 GRK3P35626 688 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 ARFIP1P53367 373 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 SLC18A1P54219 525 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 PRKAA2P54646 552 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 OR1D5P58170 312 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 SKP1P63208 163 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 MC2RQ01718 297 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 TAP2Q03519 686 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 ZNF33BQ06732 778 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 ASPHQ12797 758 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 ABRQ12979 859 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 E2F2Q14209 437 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 GRB7Q14451 532 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 TGFBIQ15582 683 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.18□□□□□ -1.1
PDGFC-205ENST00000506880 TCTE1Q5JU00 501 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 N4BP2L1Q5TBK1 243 aaPredicted RBP8.18□□□□□ -1.1
PDGFC-205ENST00000506880 MROH9Q5TGP6 573 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 FBXO38Q6PIJ6 1188 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 DHRS13Q6UX07 377 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 CAPN12Q6ZSI9 719 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 MICALCLQ6ZW33 695 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 LRRC70Q7Z2Q7 622 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 CLEC14AQ86T13 490 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 ISCA2Q86U28 154 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 GPSM1Q86YR5 675 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 SLC22A9Q8IVM8 553 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 SPNS2Q8IVW8 549 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 IQCKQ8N0W5 287 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 ZNF655Q8N720 491 aaPredicted RBP8.18□□□□□ -1.1
PDGFC-205ENST00000506880 LRRN4CLQ8ND94 238 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 ABHD11Q8NFV4 315 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 PATE1Q8WXA2 126 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 SREK1Q8WXA9 508 aaKnown RBP8.18□□□□□ -1.1
PDGFC-205ENST00000506880 NCSTNQ92542 709 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 PGM2Q96G03 612 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 LRFN5Q96NI6 719 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 TAAR9Q96RI9 348 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 HGH1Q9BTY7 390 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 EFHD1Q9BUP0 239 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 MRPL46Q9H2W6 279 aaKnown RBP8.18□□□□□ -1.1
PDGFC-205ENST00000506880 PDE7BQ9NP56 450 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 CCDC177Q9NQR7 707 aaPredicted RBP8.18□□□□□ -1.1
PDGFC-205ENST00000506880 THSD1Q9NS62 852 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 TMEM184CQ9NVA4 438 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 ARL15Q9NXU5 204 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 ACTR10Q9NZ32 417 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 OGFRQ9NZT2 677 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 COPG2Q9UBF2 871 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 ADGRE2Q9UHX3 823 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 GRID1Q9ULK0 1009 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 SRPK3Q9UPE1 567 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 PDE10AQ9Y233 779 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 TSC22D4Q9Y3Q8 395 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 KCNE2Q9Y6J6 123 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 ACACBO00763 2458 aa8.18□□□□□ -1.1
PDGFC-205ENST00000506880 APC2O95996 2303 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 HMX2A2RU54 273 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 OR6C74A6NCV1 312 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 TRIM49D1C9J1S8 452 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 POC1B-GALNT4F8VUJ3 575 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 BTN3A1O00481 513 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 PCDH17O14917 1159 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 RECKO95980 971 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms