RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 BCKDHAP12694 445 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 ACADSP16219 412 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 KIR2DL1P43626 348 aaPredicted RBP11.84□□□□□ -0.51
LIN54-206ENST00000506560 MRPL19P49406 292 aaKnown RBP11.84□□□□□ -0.51
LIN54-206ENST00000506560 HNMTP50135 292 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 AP1S2P56377 157 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 DOC2AQ14183 400 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 GRAMD1BQ3KR37 738 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 XKR6Q5GH73 641 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 ISLR2Q6UXK2 745 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 NEK10Q6ZWH5 1172 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 HDDC3Q8N4P3 179 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 ZNF480Q8WV37 535 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 CANT1Q8WVQ1 401 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 ELSPBP1Q96BH3 223 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 APOLD1Q96LR9 279 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 IKZF5Q9H5V7 419 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 TRIM39Q9HCM9 518 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 ZFR2Q9UPR6 939 aaKnown RBP11.84□□□□□ -0.51
LIN54-206ENST00000506560 MYO15AQ9UKN7 3530 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 PABPN1LA6NDY0 278 aaKnown RBP11.84□□□□□ -0.51
LIN54-206ENST00000506560 SLC16A5O15375 505 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 DFNA5O60443 496 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 OXTRP30559 389 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 GSK3BP49841 420 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 MEF2AQ02078 507 aaPredicted RBP11.84□□□□□ -0.51
LIN54-206ENST00000506560 IRF8Q02556 426 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 BLMHQ13867 455 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 STARD3Q14849 445 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 USP39Q53GS9 565 aaKnown RBP11.84□□□□□ -0.51
LIN54-206ENST00000506560 L3MBTL4Q8NA19 623 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 LRTOMTQ8WZ04 291 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 CCT7Q99832 543 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 HDAC8Q9BY41 377 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 C1orf109Q9NX04 203 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 VAPAQ9P0L0 249 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 LEF1Q9UJU2 399 aaPredicted RBP11.84□□□□□ -0.51
LIN54-206ENST00000506560 SLC28A1O00337 649 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 AXIN1O15169 862 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 KRT6AP02538 564 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 KRT6BP04259 564 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 KRT6CP48668 564 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 DPTQ07507 201 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 TCEA2Q15560 299 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 TMEM31Q5JXX7 168 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 CDKL4Q5MAI5 379 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 CATSPEREQ5SY80 951 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 CES5AQ6NT32 575 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 AMIGO2Q86SJ2 522 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 ANKRD46Q86W74 232 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 PPP2R3CQ969Q6 453 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 NEIL2Q969S2 332 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 RSPH9Q9H1X1 276 aaPredicted RBP11.84□□□□□ -0.51
LIN54-206ENST00000506560 SPNS1Q9H2V7 528 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 FZD3Q9NPG1 666 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 V9GYQ6 96 aa11.84□□□□□ -0.51
LIN54-206ENST00000506560 CCDC85CA6NKD9 419 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 CATP04040 527 aaKnown RBP11.83□□□□□ -0.52
LIN54-206ENST00000506560 COL9A1P20849 921 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 RPL10P27635 214 aaKnown RBP11.83□□□□□ -0.52
LIN54-206ENST00000506560 MAT2AP31153 395 aaKnown RBP11.83□□□□□ -0.52
LIN54-206ENST00000506560 OR4D2P58180 307 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 CDK3Q00526 305 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 LIPEQ05469 1076 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 GRIK2Q13002 908 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 ADGRE1Q14246 886 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 INPP5AQ14642 412 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 MAP7D1Q3KQU3 841 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 BCL7AQ4VC05 210 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 TMEM196Q5HYL7 178 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 FRG2Q64ET8 278 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 CAPRIN2Q6IMN6 1127 aaKnown RBP11.83□□□□□ -0.52
LIN54-206ENST00000506560 PNCKQ6P2M8 343 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 DHFR2Q86XF0 187 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 PDSS2Q86YH6 399 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 SYTL1Q8IYJ3 562 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 C10orf111Q8N326 155 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 TCAIMQ8N3R3 496 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 TMEM102Q8N9M5 508 aaPredicted RBP11.83□□□□□ -0.52
LIN54-206ENST00000506560 AURKBQ96GD4 344 aaPredicted RBP11.83□□□□□ -0.52
LIN54-206ENST00000506560 FRG2BQ96QU4 278 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 HOPXQ9BPY8 73 aaPredicted RBP11.83□□□□□ -0.52
LIN54-206ENST00000506560 SLC29A3Q9BZD2 475 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 PFDN4Q9NQP4 134 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 PPT2Q9UMR5 302 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 TCRBV3S1A0A5B6 114 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 ARPC2O15144 300 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 TPST1O60507 370 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 ADAM23O75077 832 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 TIPRLO75663 272 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 MT-ND1P03886 318 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 C8BP07358 591 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 SDC1P18827 310 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 EFNA1P20827 205 aaPredicted RBP11.83□□□□□ -0.52
LIN54-206ENST00000506560 JAK1P23458 1154 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 TBPL1P62380 186 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 RHDQ02161 417 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 CAMK2GQ13555 558 aaPredicted RBP11.83□□□□□ -0.52
LIN54-206ENST00000506560 ENPP2Q13822 863 aa11.83□□□□□ -0.52
LIN54-206ENST00000506560 HMBOX1Q6NT76 420 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms