RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 OR52E1Q8NGJ3 308 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 OR2T11Q8NH01 316 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 TWIST2Q8WVJ9 160 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 PATE1Q8WXA2 126 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 CCT6BQ92526 530 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 RAD51AP1Q96B01 352 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 WDR34Q96EX3 536 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 FOPNLQ96NB1 174 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 CAMK1GQ96NX5 476 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 NUSAP1Q9BXS6 441 aaKnown RBP10.07□□□□□ -0.8
TPM3-217ENST00000504663 TRIM54Q9BYV2 358 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 NMUR2Q9GZQ4 415 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 SPNS1Q9H2V7 528 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 TRIT1Q9H3H1 467 aaKnown RBP10.07□□□□□ -0.8
TPM3-217ENST00000504663 OSGEPL1Q9H4B0 414 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 WDR55Q9H6Y2 383 aaPredicted RBP10.07□□□□□ -0.8
TPM3-217ENST00000504663 KIR3DX1Q9H7L2 352 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 DNAJC11Q9NVH1 559 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 TAAR2Q9P1P5 351 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 VTI1BQ9UEU0 232 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 TRPS1Q9UHF7 1281 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 FBXO4Q9UKT5 387 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 SLC22A14Q9Y267 594 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 RNF11Q9Y3C5 154 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 TIMM22Q9Y584 194 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 PCM1Q15154 2024 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 ZNF318Q5VUA4 2279 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 E7EQ34 232 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 SLCO1B7G3V0H7 640 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 PIP5K1BO14986 540 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 VILLO15195 856 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 LAMTOR5O43504 91 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 TNFP01375 233 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 CAPN1P07384 714 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 HIST1H2AGP0C0S8 130 aaPredicted RBP10.06□□□□□ -0.8
TPM3-217ENST00000504663 EBLN1P0CF75 366 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 GIMD1P0DJR0 217 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 UROSP10746 265 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 F3P13726 295 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 EPB42P16452 691 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 NPPBP16860 134 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 HIST1H2ADP20671 130 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 MAP4P27816 1152 aaKnown RBP10.06□□□□□ -0.8
TPM3-217ENST00000504663 EPHA3P29320 983 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 SLC19A1P41440 591 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 CTSKP43235 329 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 CSTF1Q05048 431 aaKnown RBP10.06□□□□□ -0.8
TPM3-217ENST00000504663 CDC16Q13042 620 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 PRKG2Q13237 762 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 RBBP7Q16576 425 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 SLC30A9Q6PML9 568 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 SLCO4C1Q6ZQN7 724 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 CHSY3Q70JA7 882 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 LARP4Q71RC2 724 aaKnown RBP eCLIP10.06□□□□□ -0.8
TPM3-217ENST00000504663 RD3Q7Z3Z2 195 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 C17orf82Q86X59 251 aaPredicted RBP10.06□□□□□ -0.8
TPM3-217ENST00000504663 TREML1Q86YW5 311 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 NAGSQ8N159 534 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 CDYL2Q8N8U2 506 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 FLVCR1-AS1Q8TAF5 88 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 ACTRT2Q8TDY3 377 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 ATL1Q8WXF7 558 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 USP7Q93009 1102 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 FAR2Q96K12 515 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 HIST1H2AHQ96KK5 128 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 HIST1H2AJQ99878 128 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 H2AFJQ9BTM1 129 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 CCDC28BQ9BUN5 200 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 MVB12BQ9H7P6 319 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 TMEM74BQ9NUR3 256 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 IMP3Q9NV31 184 aaKnown RBP10.06□□□□□ -0.8
TPM3-217ENST00000504663 HEY2Q9UBP5 337 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 GIMAP2Q9UG22 337 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 APOBEC3BQ9UH17 382 aaKnown RBP10.06□□□□□ -0.8
TPM3-217ENST00000504663 BTRCQ9Y297 605 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 FIS1Q9Y3D6 152 aa10.06□□□□□ -0.8
TPM3-217ENST00000504663 HEATR5BQ9P2D3 2071 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 KNL1Q8NG31 2342 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 GOLGA8QA0A0J9YX86 632 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 GOLGA8OA6NCC3 632 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 CCT8L1PA6NM43 557 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 PDZK1P1A8MUH7 402 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 CAPN14A8MX76 684 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 GOLGA8NF8WBI6 632 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 IFRD1O00458 451 aaPredicted RBP10.05□□□□□ -0.8
TPM3-217ENST00000504663 FCHO1O14526 889 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 UBOX5O94941 541 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 OTCP00480 354 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 ENO1P06733 434 aaKnown RBP10.05□□□□□ -0.8
TPM3-217ENST00000504663 ALDOCP09972 364 aaKnown RBP10.05□□□□□ -0.8
TPM3-217ENST00000504663 T-ENOLP0DO92 83 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 PSMB5P28074 263 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 SOX11P35716 441 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 CASP2P42575 452 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 PIK3CGP48736 1102 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 CCNG1P51959 295 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 C1orf61Q13536 156 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 ARHGAP19Q14CB8 494 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 TMEM198Q66K66 360 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 ADNP2Q6IQ32 1131 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms