RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SEC14L5O43304 696 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 NDUFS3O75489 264 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 NEBLO76041 1014 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 OR4F21O95013 312 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 LDLRP01130 860 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 SLC2A4P14672 509 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 ADRA1AP35348 466 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 IGHMBP2P38935 993 aaKnown RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 SLC1A3P43003 542 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 SOX10P56693 466 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 PPP1R8Q12972 351 aaKnown RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 PRKAA1Q13131 559 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 KRT33BQ14525 404 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 TXNRD3NBQ6F5E7 133 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 HSDL2Q6YN16 418 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 FJX1Q86VR8 437 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 LRRC6Q86X45 466 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 GPR137CQ8N3F9 429 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 NETO1Q8TDF5 533 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 SNRNP40Q96DI7 357 aaKnown RBP5.06□□□□□ -1.6
NIPBL-204ENST00000504430 TSGA10Q9BZW7 698 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 EURLQ9NYK6 297 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 GCNT4Q9P109 453 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 MGAT4BQ9UQ53 548 aa5.06□□□□□ -1.6
NIPBL-204ENST00000504430 TMEM89A2RUT3 159 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 FFAR3O14843 346 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 GPR42O15529 346 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 CSO75390 466 aaKnown RBP5.05□□□□□ -1.6
NIPBL-204ENST00000504430 UFL1O94874 794 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 MOCS3O95396 460 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 PROS1P07225 676 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 CYP2C18P33260 490 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 GTF2A1P52655 376 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-204ENST00000504430 ARPC4P59998 168 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 CACNG1Q06432 222 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 DRAP1Q14919 205 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-204ENST00000504430 NKAIN1Q4KMZ8 207 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 LRRC73Q5JTD7 316 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 CEP78Q5JTW2 689 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 DLEU7Q6UYE1 221 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 NCCRP1Q6ZVX7 275 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-204ENST00000504430 NLRX1Q86UT6 975 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 LRRC8AQ8IWT6 810 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 NUDT10Q8NFP7 164 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 OIT3Q8WWZ8 545 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 ST8SIA2Q92186 375 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 FCGR1BQ92637 280 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 R3HDM4Q96D70 268 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 NUDT11Q96G61 164 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 SLC41A3Q96GZ6 507 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 MUS81Q96NY9 551 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 ROGDIQ9GZN7 287 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 OPN3Q9H1Y3 402 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-204ENST00000504430 HIPK2Q9H2X6 1198 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 DPEP2Q9H4A9 486 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 TMEM231Q9H6L2 316 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 GTSE1Q9NYZ3 720 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 CTTNBP2NLQ9P2B4 639 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 LARSQ9P2J5 1176 aaKnown RBP5.05□□□□□ -1.6
NIPBL-204ENST00000504430 REXO2Q9Y3B8 237 aaKnown RBP5.05□□□□□ -1.6
NIPBL-204ENST00000504430 A0A0A0MQY5 61 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 FAM90A10PA6NDY2 464 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 F5H697 171 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 SPRY2O43597 315 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 ECE2O60344 883 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 PRAF2O60831 178 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 LRP3O75074 770 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 CELA2BP08218 269 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-204ENST00000504430 ITGALP20701 1170 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 S1PR1P21453 382 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 KLRC2P26717 231 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 RPS6KA3P51812 740 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 PEX6Q13608 980 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 ME3Q16798 604 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 CCDC14Q49A88 953 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 SLC22A10Q63ZE4 541 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 WSCD1Q658N2 575 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 ZSCAN25Q6NSZ9 544 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 LINC00114Q6XXX2 140 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 FAM131BQ86XD5 332 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 OR10H4Q8NGA5 316 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 OR4K14Q8NGD5 310 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 OR9K2Q8NGE7 335 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 CD300LFQ8TDQ1 290 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 CPA5Q8WXQ8 436 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 GPR78Q96P69 363 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 PCDHB18PQ96TA0 734 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 SLC22A11Q9NSA0 550 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 DDX28Q9NUL7 540 aaKnown RBP5.05□□□□□ -1.6
NIPBL-204ENST00000504430 WNT16Q9UBV4 365 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 STAP1Q9ULZ2 295 aa5.05□□□□□ -1.6
NIPBL-204ENST00000504430 UBE2QL1A1L167 161 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 SDHDO14521 159 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 MED26O95402 600 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 ALDOAP04075 364 aaKnown RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 CYP11B1P15538 503 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 SP100P23497 879 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 LRPAP1P30533 357 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 PRDX2P32119 198 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 MEOX1P50221 254 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms