RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 LRRC8CQ8TDW0 803 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 EXT2Q93063 718 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 TRMT61AQ96FX7 289 aaKnown RBP4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 NAF1Q96HR8 494 aaKnown RBP4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 TMEM68Q96MH6 324 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 FCRL5Q96RD9 977 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 PLIN2Q99541 437 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 CCDC77Q9BR77 488 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 NFKBIZQ9BYH8 718 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 POLR1EQ9GZS1 481 aaKnown RBP4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 WDR26Q9H7D7 661 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 YY1AP1Q9H869 796 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 FANCEQ9HB96 536 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 TMEM161AQ9NX61 479 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 PLK2Q9NYY3 685 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 R3HDM2Q9Y2K5 976 aaKnown RBP4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 WBP11Q9Y2W2 641 aaKnown RBP4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 AAR2Q9Y312 384 aaKnown RBP4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 NAALAD2Q9Y3Q0 740 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 ABCC4O15439 1325 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 CDHR2Q9BYE9 1310 aa4.16□□□□□ -1.74
PDLIM1P4-201ENST00000504327 SBF1O95248 1867 aa4.15□□□□□ -1.74
PDLIM1P4-201ENST00000504327 FER1L6Q2WGJ9 1857 aa4.15□□□□□ -1.74
PDLIM1P4-201ENST00000504327 C2CD4BA6NLJ0 364 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 E9PBE3 544 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SMAD9O15198 467 aaKnown RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PLRG1O43660 514 aaKnown RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 BUB1O43683 1085 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 STRNO43815 780 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HSF2BPO75031 334 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MTX2O75431 263 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MED24O75448 989 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MOCS3O95396 460 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SLC16A8O95907 504 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PLGP00747 810 aaPredicted RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PLAUP00749 431 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HEXAP06865 529 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TPM1P09493 284 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 OR52Z1P0C646 297 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CTSAP10619 480 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CSF2RAP15509 400 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PFKFB1P16118 471 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 EEF1B2P24534 225 aaKnown RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 DNAJB1P25685 340 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GSTM2P28161 218 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 NDUFS1P28331 727 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 IGHMBP2P38935 993 aaKnown RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 FRKP42685 505 aaPredicted RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SUOXP51687 545 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 EFNA5P52803 228 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 OAZ1P54368 228 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 UCP2P55851 309 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HAND2P61296 217 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RPS13P62277 151 aaKnown RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 OVGP1Q12889 678 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ABRQ12979 859 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 DDX39BQ13838 428 aaKnown RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 LPIN1Q14693 890 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZMYND11Q15326 602 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CNGA3Q16281 694 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZNF260Q3ZCT1 412 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 KCTD21Q4G0X4 260 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GLE1Q53GS7 698 aaKnown RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CFAP157Q5JU67 520 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ACSM6Q6P461 480 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 IL20RBQ6UXL0 311 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MTSS1LQ765P7 747 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MRPL10Q7Z7H8 261 aaKnown RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 VASH2Q86V25 355 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ARID3BQ8IVW6 561 aaPredicted RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PM20D2Q8IYS1 436 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SCYL3Q8IZE3 742 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 VPS52Q8N1B4 723 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 BBS5Q8N3I7 341 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 FAM133AQ8N9E0 248 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 C9orf106Q8NAJ2 232 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 FAM184AQ8NB25 1140 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 UXS1Q8NBZ7 420 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HJURPQ8NCD3 748 aaPredicted RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 OR52L2PQ8NGH6 319 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 OR52E1Q8NGJ3 308 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GLMPQ8WWB7 406 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ROBO4Q8WZ75 1007 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 AKAP1Q92667 903 aaKnown RBP eCLIP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HMCESQ96FZ2 354 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ADAD1Q96M93 576 aaKnown RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TCEANC2Q96MN5 208 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZNF560Q96MR9 790 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SPATA13Q96N96 652 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TMEM79Q9BSE2 394 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SCNM1Q9BWG6 230 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GLIS2Q9BZE0 524 aaPredicted RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CCSER1Q9C0I3 900 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RAB17Q9H0T7 212 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GORASP2Q9H8Y8 452 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RNPEPL1Q9HAU8 725 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GPN1Q9HCN4 374 aaPredicted RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PALMDQ9NP74 551 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ENTPD7Q9NQZ7 604 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms