RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 CPT1BQ92523 772 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 AP3S1Q92572 193 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 GLMNQ92990 594 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 DACT3Q96B18 629 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RCN3Q96D15 328 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 LGALS12Q96DT0 336 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PIGSQ96S52 555 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RBM4BQ9BQ04 359 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 FEM1AQ9BSK4 669 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RBM4Q9BWF3 364 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SLC19A3Q9BZV2 496 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CCDC90BQ9GZT6 254 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ZFP14Q9HCL3 533 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ABCB10Q9NRK6 738 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RBAKQ9NYW8 714 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 GLTPQ9NZD2 209 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CFAP54Q96N23 3096 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 NPHP3-ACAD11A0A0J9YXS1 232 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 AGAP5A6NIR3 686 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 MED7O43513 233 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TNFSF14O43557 240 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CST8O60676 142 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 WDR47O94967 919 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 NFKB1P19838 968 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PIK3CBP42338 1070 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 NR2C2P49116 596 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ARSFP54793 590 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RAG2P55895 527 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 STX4Q12846 297 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 FAPQ12884 760 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ADAM15Q13444 863 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TBCEQ15813 527 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ANKRD39Q53RE8 183 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 NSUN5P2Q63ZY6 315 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 FBXL19Q6PCT2 694 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM26Q6ZUK4 368 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RRM2BQ7LG56 351 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CATSPER4Q7RTX7 472 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TSEN54Q7Z6J9 526 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 GLRX5Q86SX6 157 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ZBTB33Q86T24 672 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SLC22A16Q86VW1 577 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PROSER1Q86XN7 944 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 DEPDC4Q8N2C3 294 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 MYCT1Q8N699 235 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 LRRC17Q8N6Y2 441 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 OR6S1Q8NH40 331 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 FANK1Q8TC84 345 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TSPAN17Q96FV3 270 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CDKN2AIPNLQ96HQ2 116 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 MESP1Q9BRJ9 268 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 FAM213AQ9BRX8 229 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 C1QTNF7Q9BXJ2 289 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RANBP3Q9H6Z4 567 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ZBTB26Q9HCK0 441 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RASSF1Q9NS23 344 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 DNAJC11Q9NVH1 559 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 DUS2Q9NX74 493 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 FBLN5Q9UBX5 448 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 MARCOQ9UEW3 520 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ZFR2Q9UPR6 939 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 KCNK7Q9Y2U2 307 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 C2orf71A6NGG8 1288 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RGS10O43665 173 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 GMDSO60547 372 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RFPL1O75677 317 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SLITRK5O94991 958 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CDK1P06493 297 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CKMT1AP12532 417 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 GALP22466 123 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ATP5F1P24539 256 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 S100PP25815 95 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 MNDAP41218 407 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CPT1AP50416 773 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 DGKQP52824 942 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PEX3P56589 373 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 GTF2IP78347 998 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ROR1Q01973 937 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 EEF1A2Q05639 463 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 NOGQ13253 232 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 EFR3AQ14156 821 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 GALEQ14376 348 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 MFSD13AQ14CX5 517 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 EIF4HQ15056 248 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PITRM1Q5JRX3 1037 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CLLU1Q5K131 121 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 HES5Q5TA89 166 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 HACD4Q5VWC8 232 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 BEND4Q6ZU67 534 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RHOUQ7L0Q8 258 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 MICALL2Q8IY33 904 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 C1orf52Q8N6N3 182 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 FAM181AQ8N9Y4 354 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ZSCAN1Q8NBB4 408 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TEX47Q8TBZ9 253 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 DEPDC1BQ8WUY9 529 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 L3HYPDHQ96EM0 354 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PIWIL1Q96J94 861 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 FICDQ9BVA6 458 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 DCSTAMPQ9H295 470 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms