RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 DESI2Q9BSY9 194 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 DNAI2Q9GZS0 605 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 ARRDC1-AS1Q9H2J1 176 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 TFB2MQ9H5Q4 396 aaKnown RBP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZBTB20Q9HC78 741 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 Q9N2K0 584 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 SERINC1Q9NRX5 453 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZFP57Q9NU63 452 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 PDRG1Q9NUG6 133 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 ABT1Q9ULW3 272 aaKnown RBP2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 SLC7A7Q9UM01 511 aa2.26□□□□□ -2.05
HMGB1P35-201ENST00000503360 PCDH11YQ9BZA8 1340 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 NEMP2A6NFY4 417 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 DUXAA6NLW8 204 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 CLDN4O14493 209 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 PTGESO14684 152 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 WDR46O15213 610 aaKnown RBP2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 FGF17O60258 216 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 PRKNO60260 465 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 LMX1BO60663 402 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 B3GALNT1O75752 331 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 ACSL3O95573 720 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 MT-ND3P03897 115 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 RNF224P0DH78 156 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 IFNAR1P17181 557 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 DESP17661 470 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 GNAZP19086 355 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 JAK1P23458 1154 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 NR2C2P49116 596 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 NPY4RP50391 375 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 ASCL1P50553 236 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 PDX1P52945 283 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 LIMK1P53667 647 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 POLR2LP62875 67 aaKnown RBP2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 MZT1Q08AG7 82 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 DMP1Q13316 513 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF273Q14593 569 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 RBBP5Q15291 538 aaKnown RBP2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF674Q2M3X9 581 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 KRTAP13-3Q3SY46 172 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 PHLDA2Q53GA4 152 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 SYT14P1Q58G82 188 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 TECRLQ5HYJ1 363 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 DCAF10Q5QP82 559 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 PRR27Q6MZM9 219 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 C11orf63Q6NUN7 778 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 TATDN1Q6P1N9 297 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 SHQ1Q6PI26 577 aaKnown RBP2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 DCLRE1AQ6PJP8 1040 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 SUSD1Q6UWL2 747 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 PPP1R21Q6ZMI0 780 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 SLC26A9Q7LBE3 791 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 NUP54Q7Z3B4 507 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 ARHGAP22Q7Z5H3 698 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF554Q86TJ5 538 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 TLK2Q86UE8 772 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 METTL23Q86XA0 190 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 TMEM139Q8IV31 216 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 MAML2Q8IZL2 1156 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 DNAJC22Q8N4W6 341 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 NAT8LQ8N9F0 302 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 IQUBQ8NA54 791 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 NPEPL1Q8NDH3 523 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 OR1J1Q8NGS3 322 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 DEPDC1BQ8WUY9 529 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 CCDC107Q8WV48 283 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 IRGQQ8WZA9 623 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 FAM162AQ96A26 154 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 MOB3AQ96BX8 217 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 DHX58Q96C10 678 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 STAMBPL1Q96FJ0 436 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 OTUB1Q96FW1 271 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF354BQ96LW1 612 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 MUS81Q96NY9 551 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 FNBP1Q96RU3 617 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 EPYCQ99645 322 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 CPNE1Q99829 537 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 CITED2Q99967 270 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 RHNO1Q9BSD3 238 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 PI4K2AQ9BTU6 479 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 S1PR5Q9H228 398 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 BICC1Q9H694 974 aaKnown RBP2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 A4GALTQ9NPC4 353 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 FAM118AQ9NWS6 357 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 ADPRHL2Q9NX46 363 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 TBC1D7Q9P0N9 293 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 LRWD1Q9UFC0 647 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 MTUS1Q9ULD2 1270 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 AGTPBP1Q9UPW5 1226 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 LIPGQ9Y5X9 500 aa2.25□□□□□ -2.05
HMGB1P35-201ENST00000503360 ARHGEF37A1IGU5 675 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 CCDC69A6NI79 296 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 DDX39AO00148 427 aaKnown RBP2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 P2RY10O00398 339 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 RTCAO00442 366 aaKnown RBP2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 PLOD2O00469 737 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 AP5Z1O43299 807 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 STX6O43752 255 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 RNASEH1O60930 286 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms