RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 HNRNPLLQ8WVV9 542 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 DLG3Q92796 817 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 RBBP8Q99708 897 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 KLHL25Q9H0H3 589 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 POPDC3Q9HBV1 291 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 NINJ2Q9NZG7 142 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 LAMA5O15230 3695 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 ZNF839A8K0R7 811 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 RAD1O60671 282 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 SLC16A8O95907 504 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 ZNF28P17035 718 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 CYP2A7P20853 494 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 SAT1P21673 171 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 PNLIPRP1P54315 467 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 POU4F1Q01851 419 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 MAP7Q14244 749 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 SF1Q15637 639 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 GPR19Q15760 415 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 GRTP1Q5TC63 336 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 BROXQ5VW32 411 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 CDHR3Q6ZTQ4 885 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 FAM20CQ8IXL6 584 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 PPM1NQ8N819 430 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 ZNF480Q8WV37 535 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 SMPDL3AQ92484 453 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 NKD1Q969G9 470 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 GPR22Q99680 433 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 FUT8Q9BYC5 575 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 ULBP3Q9BZM4 244 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 CDC42EP4Q9H3Q1 356 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 FANCEQ9HB96 536 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 PARVBQ9HBI1 364 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 ADAMTS6Q9UKP5 1117 aa17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 MTO1Q9Y2Z2 717 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-209ENST00000503346 TIAF1O95411 115 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 SYF2O95926 243 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 RHOXF2BP0C7M4 288 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 PHBP35232 272 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 SPRP35270 261 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 ATP1A2P50993 1020 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 UCNP55089 124 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 PWWP2BQ6NUJ5 590 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 TIPARPQ7Z3E1 657 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 CEP97Q8IW35 865 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 NLGN4XQ8N0W4 816 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 NKAPQ8N5F7 415 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 NLGN4YQ8NFZ3 816 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 OR2A1Q8NGT9 310 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 MCOLN3Q8TDD5 553 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 ANKRD7Q92527 254 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 CCDC138Q96M89 665 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 RHOXF2Q9BQY4 288 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 FAM60AQ9NP50 221 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 INTS7Q9NVH2 962 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 PDE10AQ9Y233 779 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 KLK4Q9Y5K2 254 aa17.56■□□□□ 0.4
PDLIM7-209ENST00000503346 ZFHX4Q86UP3 3567 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 ADAMTS20P59510 1910 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 E7ENX8 843 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 KIAA0754O94854 1291 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 WISP3O95389 354 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 MAGP20916 626 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 PSMB5P28074 263 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 IMPA1P29218 277 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 GABRA4P48169 554 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 SLC12A2P55011 1212 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 TAP2Q03519 686 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 ZNF460Q14592 562 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 USP10Q14694 798 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 EFTUD2Q15029 972 aaKnown RBP eCLIP17.55■□□□□ 0.43e-28■■■□□ 19.1
PDLIM7-209ENST00000503346 KIAA1614Q5VZ46 1190 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 C19orf48Q6RUI8 117 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 LRRC56Q8IYG6 542 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 CACNA2D3Q8IZS8 1091 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 DNAJC22Q8N4W6 341 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 OR2L3Q8NG85 312 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 ZUFSPQ96AP4 578 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 TSPAN17Q96FV3 270 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 CCNL2Q96S94 520 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 CYTH2Q99418 400 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 NFU1Q9UMS0 254 aa17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 KMT2BQ9UMN6 2715 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-209ENST00000503346 AHCTF1Q8WYP5 2266 aa17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 TARM1B6A8C7 271 aa17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 TMEM150CB9EJG8 249 aa17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 FAM155BO75949 473 aa17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 GRIA3P42263 894 aa17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 TMPRSS3P57727 454 aa17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 SLMAPQ14BN4 828 aa17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 NAA25Q14CX7 972 aa17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 ZKSCAN8Q15776 578 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 PHKG1Q16816 387 aa17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 COL28A1Q2UY09 1125 aa17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 MANEAQ5SRI9 462 aa17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 UBAP2Q5T6F2 1119 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 FCRL6Q6DN72 434 aa17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 FIGLAQ6QHK4 219 aa17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 SYTL1Q8IYJ3 562 aa17.54■□□□□ 0.4
PDLIM7-209ENST00000503346 ESX1Q8N693 406 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms