RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ZNF12P17014 697 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 HOXA11P31270 313 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 ADARP55265 1226 aaKnown RBP4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 BPIFB3P59826 476 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 RPS18P62269 152 aaKnown RBP4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 EGR4Q05215 589 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 SMC1AQ14683 1233 aaKnown RBP4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 RPS6KA1Q15418 735 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 PTGISQ16647 500 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 CA9Q16790 459 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 CTU2Q2VPK5 515 aaKnown RBP4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 ASPRV1Q53RT3 343 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 LONP2Q86WA8 852 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 SIAH3Q8IW03 269 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 CNTN4Q8IWV2 1026 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 PEX5LQ8IYB4 626 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 ZNF619Q8N2I2 560 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 CLEC18CQ8NCF0 446 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 LPCAT1Q8NF37 534 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 OR13J1Q8NGT2 312 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 FGFBP3Q8TAT2 258 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 UBLCP1Q8WVY7 318 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 IRGQQ8WZA9 623 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 SGF29Q96ES7 293 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 THOC1Q96FV9 657 aaKnown RBP4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 HMCESQ96FZ2 354 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 KLHL5Q96PQ7 755 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 MYADMQ96S97 322 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 PRRG4Q9BZD6 226 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 ODF2LQ9ULJ1 636 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 ISY1Q9ULR0 285 aaKnown RBP4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 STX8Q9UNK0 236 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 WDR83OSQ9Y284 106 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 JRKLQ9Y4A0 524 aa4.99□□□□□ -1.61
HMGB1P3-201ENST00000502802 PRG4Q92954 1404 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 TRAV24A0A0B4J272 114 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 C19orf81C9J6K1 198 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 KBTBD13C9JR72 458 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 E9PI62 339 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 FLRT2O43155 660 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 PRAF2O60831 178 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 CRCPO75575 148 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 ATP6AP2O75787 350 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 AKAP3O75969 853 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 C8orf89P0DMQ9 161 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 HSPA8P11142 646 aaKnown RBP4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 IRF2P14316 349 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 JAK1P23458 1154 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 CDX1P47902 265 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 NT5C2P49902 561 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 CLDN15P56746 228 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 SEC61A1P61619 476 aaKnown RBP4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 CX3CL1P78423 397 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 FOLH1Q04609 750 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 ILF2Q12905 390 aaKnown RBP4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 MFAP5Q13361 173 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 UGT3A2Q3SY77 523 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 PARP10Q53GL7 1025 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 FAM171BQ6P995 826 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 PIGWQ7Z7B1 504 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 DCP1BQ8IZD4 617 aaKnown RBP4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 SFRP1Q8N474 314 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 RASGEF1AQ8N9B8 481 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 BCL2L2Q92843 193 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 LINGO1Q96FE5 620 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 CSTL1Q9H114 145 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 IL25Q9H293 177 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 GSN-AS1Q9NRJ2 163 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 OLFML3Q9NRN5 406 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 ZNF701Q9NV72 531 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 WNT16Q9UBV4 365 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 TMED3Q9Y3Q3 217 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 CUL7Q14999 1698 aa4.98□□□□□ -1.61
HMGB1P3-201ENST00000502802 TSPOAP1O95153 1857 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 C13orf42A0A1B0GVH6 325 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 A0A1W2PRB8 838 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 CASTOR2A6NHX0 329 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 PROB1E7EW31 1015 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 CTDSPLO15194 276 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 TTI1O43156 1089 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 NME6O75414 186 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 RPS6KA5O75582 802 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 PDE9AO76083 593 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 ANKRD34CP0C6C1 535 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 VCLP18206 1134 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 EPORP19235 508 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 MNDAP41218 407 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 RPL21P46778 160 aaKnown RBP4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 C21orf58P58505 322 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 YBEYP58557 167 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 TUBA1BP68363 451 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 DMPKQ09013 629 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 ZNF415Q09FC8 603 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 SGCBQ16585 318 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 HFEQ30201 348 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 AARDQ4LEZ3 155 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 PODNL1Q6PEZ8 512 aa4.97□□□□□ -1.61
HMGB1P3-201ENST00000502802 AMIGO1Q86WK6 493 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms