RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ERMAPQ96PL5 475 aaPredicted RBP16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 ZFYVE1Q9HBF4 777 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 C11orf16Q9NQ32 467 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 ZNF232Q9UNY5 417 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 I3L521 148 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 IRAK2O43187 625 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 KHDRBS3O75525 346 aaKnown RBP16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 BMP7P18075 431 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 NUDT6P53370 316 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 RFTN2Q52LD8 501 aaPredicted RBP16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 C7orf61Q8IZ16 206 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 ANKLE1Q8NAG6 615 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 BRD9Q9H8M2 597 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 ITM2CQ9NQX7 267 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 ENPP5Q9UJA9 477 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 RUVBL1Q9Y265 456 aaKnown RBP16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 HSPB11Q9Y547 144 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 CCDC88AQ3V6T2 1871 aa16.85■□□□□ 0.29
HMGXB3-201ENST00000502717 NWD2Q9ULI1 1742 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 DLGAP1O14490 977 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 CXCR2P25025 360 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 ALDH3B2P48448 385 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 CXCR3P49682 368 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 HMGCS1Q01581 520 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 HECTD3Q5T447 861 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 IFNLR1Q8IU57 520 aaPredicted RBP16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 SLC7A5P1Q8MH63 180 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 ACBD6Q9BR61 282 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 KCNN2Q9H2S1 579 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 GPN2Q9H9Y4 310 aaPredicted RBP16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 SEMA3GQ9NS98 782 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 ANKMY1Q9P2S6 941 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 ENTPD4Q9Y227 616 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 PRKAG1P54619 331 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 SGCGQ13326 291 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 LRP8Q14114 963 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 SEMA3AQ14563 771 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 MSANTD2Q6P1R3 559 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 TMEM102Q8N9M5 508 aaPredicted RBP16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 CORO1BQ9BR76 489 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 C1QTNF7Q9BXJ2 289 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 SEC14L3Q9UDX4 400 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 ZNF510Q9Y2H8 683 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 ZCWPW2A0A1B0GU75 182 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 CDC7O00311 574 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 INSIG1O15503 277 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 SLC28A2O43868 658 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 DFNA5O60443 496 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 MATN4O95460 622 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 GNAO1P09471 354 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 SLC6A4P31645 630 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 TGFBR2P37173 567 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 SIRPB2Q5JXA9 342 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 B3GNT9Q6UX72 402 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 CEP68Q76N32 757 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 SYVN1Q86TM6 617 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 DENND1CQ8IV53 801 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 LILRA2Q8N149 483 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 RHEBL1Q8TAI7 183 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 KLHL6Q8WZ60 621 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 USP7Q93009 1102 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 MAGEH1Q9H213 219 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 RAD18Q9NS91 495 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 FAM105AQ9NUU6 356 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 ZNF282Q9UDV7 671 aaPredicted RBP16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 BRCC3P46736 316 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 OR4D2P58180 307 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 SP2Q02086 613 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 PNCKQ6P2M8 343 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 MYO19Q96H55 970 aa16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 PAQR5Q9NXK6 330 aaPredicted RBP16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 N4BP2Q86UW6 1770 aaPredicted RBP16.84■□□□□ 0.29
HMGXB3-201ENST00000502717 GLYATL1P3A0A0U1RQE8 302 aa16.83■□□□□ 0.29
HMGXB3-201ENST00000502717 MMP3P08254 477 aa16.83■□□□□ 0.29
HMGXB3-201ENST00000502717 ELNP15502 786 aa16.83■□□□□ 0.29
HMGXB3-201ENST00000502717 CENPAP49450 140 aa16.83■□□□□ 0.29
HMGXB3-201ENST00000502717 SDHAF4Q5VUM1 108 aa16.83■□□□□ 0.29
HMGXB3-201ENST00000502717 VN1R5Q7Z5H4 357 aa16.83■□□□□ 0.29
HMGXB3-201ENST00000502717 METTL3Q86U44 580 aaKnown RBP16.83■□□□□ 0.29
HMGXB3-201ENST00000502717 FBXO22Q8NEZ5 403 aa16.83■□□□□ 0.29
HMGXB3-201ENST00000502717 TBC1D15Q8TC07 691 aa16.83■□□□□ 0.29
HMGXB3-201ENST00000502717 MAPKAP1Q9BPZ7 522 aa16.83■□□□□ 0.29
HMGXB3-201ENST00000502717 MINDY3Q9H8M7 445 aa16.83■□□□□ 0.29
HMGXB3-201ENST00000502717 TLR5O60602 858 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 RFX3P48380 749 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 SNRPD1P62314 119 aaKnown RBP16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 ATG9BQ674R7 924 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 MTSS1LQ765P7 747 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 ARFGAP1Q8N6T3 406 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 VANGL1Q8TAA9 524 aaPredicted RBP16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 ZNF675Q8TD23 568 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 LPPQ93052 612 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 RFKQ969G6 155 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 MCUBQ9NWR8 336 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 PCDH8O95206 1070 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 FAM163BP0C2L3 166 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 IL7P13232 177 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 ENGP17813 658 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 PCSK6P29122 969 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms