RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 HTR3DQ70Z44 454 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 DET1Q7L5Y6 550 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 MDGA2Q7Z553 956 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 ARL14Q8N4G2 192 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZNF321PQ8N8H1 164 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 B4GALNT2Q8NHY0 566 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 XAGE5Q8WWM1 108 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 RAD54LQ92698 747 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 PEX13Q92968 403 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 ESAMQ96AP7 390 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 R3HDM4Q96D70 268 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 PTCD3Q96EY7 689 aaKnown RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 BOD1Q96IK1 185 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 PIWIL1Q96J94 861 aaKnown RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 LOXL4Q96JB6 756 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 EGLN2Q96KS0 407 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 SSX3Q99909 188 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 DDX50Q9BQ39 737 aaKnown RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZNF416Q9BWM5 594 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 GTPBP2Q9BX10 602 aaKnown RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 CAPS2Q9BXY5 557 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 LSG1Q9H089 658 aaKnown RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 STMN4Q9H169 189 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 FANCEQ9HB96 536 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 Q9N2J8 555 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 KCNMB3Q9NPA1 279 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 KLHL1Q9NR64 748 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 PANK4Q9NVE7 773 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 PARPBPQ9NWS1 579 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 MGAT4CQ9UBM8 478 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 UBQLN2Q9UHD9 624 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 TSPAN16Q9UKR8 245 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 DLGAP4Q9Y2H0 992 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 MAP3K2Q9Y2U5 619 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 NOSIPQ9Y314 301 aaKnown RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 MFHAS1Q9Y4C4 1052 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 V9GYY5 206 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 WDR90Q96KV7 1748 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZNF609O15014 1411 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 PHLPP2Q6ZVD8 1323 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 CDHR2Q9BYE9 1310 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 LAMB2P55268 1798 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 HTTP42858 3142 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 C15orf38-AP3S2A0A0A6YYH1 394 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 FAM230AA0A1W2PPH8 454 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 MACROD2A1Z1Q3 448 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 ANKDD1BA6NHY2 528 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 DBX1A6NMT0 343 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 H0YIG0 161 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 AP4M1O00189 453 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 HIP1O00291 1037 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 MED7O43513 233 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 FOXD2O60548 495 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 JRKO75564 520 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 SLITRK3O94933 977 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 PGLSO95336 258 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 STAMBPO95630 424 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 PCCAP05165 728 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 ANXA8P13928 327 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 DDX5P17844 614 aaKnown RBP4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 DRD5P21918 477 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 ACAT1P24752 427 aaKnown RBP4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 PKLRP30613 574 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 GABRA5P31644 462 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 GKP32189 559 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 SLC8A1P32418 973 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 HSD17B2P37059 387 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 LIPAP38571 399 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 CCT6AP40227 531 aaKnown RBP4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 ARHGAP25P42331 645 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 SELENOPP49908 381 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 TPTEP56180 551 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 HAND2P61296 217 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 SIRPAP78324 504 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 SORDQ00796 357 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 GUCY1B3Q02153 619 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 SPOCK1Q08629 439 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 PRKD1Q15139 912 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 SHBQ15464 509 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 Q5PR19 223 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 BEND3Q5T5X7 828 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 ANXA8L1Q5VT79 327 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 KCTD11Q693B1 232 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 SP5Q6BEB4 398 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 TXNRD3NBQ6F5E7 133 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 CYB5D1Q6P9G0 228 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 ARSKQ6UWY0 536 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 TBC1D26Q86UD7 250 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 RTN4RL2Q86UN3 420 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 EXOC3L1Q86VI1 746 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 GRAMD2AQ8IUY3 354 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 SIAH3Q8IW03 269 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 LAS2Q8IYD9 372 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 CADM3Q8N126 398 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 TMEM217Q8N7C4 229 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 EXD3Q8N9H8 876 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 SPERTQ8NA61 448 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 FAM184AQ8NB25 1140 aa4.19□□□□□ -1.74
HMGB1P21-201ENST00000502313 CPEB3Q8NE35 698 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms