RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 EIF3CLB5ME19 914 aaKnown RBP6.06□□□□□ -1.44
CRNDE-202ENST00000502066 HHLA1C9JL84 531 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 CASKO14936 926 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 MED24O75448 989 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 PALMO75781 387 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 EML2O95834 649 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 MT-CO1P00395 513 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 UQCRHP07919 91 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 OR52Z1P0C646 297 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 SRCP12931 536 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 IDEP14735 1019 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 GYPEP15421 78 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 AMD1P17707 334 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 APOBEC3AP31941 199 aaPredicted RBP6.06□□□□□ -1.44
CRNDE-202ENST00000502066 DDX10Q13206 875 aaKnown RBP6.06□□□□□ -1.44
CRNDE-202ENST00000502066 MTM1Q13496 603 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 DCAF17Q5H9S7 520 aaPredicted RBP6.06□□□□□ -1.44
CRNDE-202ENST00000502066 NADSYN1Q6IA69 706 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 DPY19L3Q6ZPD9 716 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 B4GALNT4Q76KP1 1039 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 DIS3L2Q8IYB7 885 aaKnown RBP6.06□□□□□ -1.44
CRNDE-202ENST00000502066 TTC30BQ8N4P2 665 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 RELL2Q8NC24 303 aaPredicted RBP6.06□□□□□ -1.44
CRNDE-202ENST00000502066 TMEM161BQ8NDZ6 487 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 OR2Y1Q8NGV0 311 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 CALML4Q96GE6 196 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 EIF3CQ99613 913 aaKnown RBP6.06□□□□□ -1.44
CRNDE-202ENST00000502066 GATA5Q9BWX5 397 aaPredicted RBP6.06□□□□□ -1.44
CRNDE-202ENST00000502066 STN1Q9H668 368 aaKnown RBP6.06□□□□□ -1.44
CRNDE-202ENST00000502066 CSNK1G1Q9HCP0 422 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 SARS2Q9NP81 518 aaKnown RBP6.06□□□□□ -1.44
CRNDE-202ENST00000502066 KLHL1Q9NR64 748 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 TRNAU1APQ9NX07 287 aaKnown RBP6.06□□□□□ -1.44
CRNDE-202ENST00000502066 SIX4Q9UIU6 781 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 COX11Q9Y6N1 276 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 CPAMD8Q8IZJ3 1885 aa6.06□□□□□ -1.44
CRNDE-202ENST00000502066 IGHV4-30-2A0A087WSY4 118 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.05□□□□□ -1.44
CRNDE-202ENST00000502066 TCRBV16S1A1N1A0A5B0 115 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 OR5H15A6NDH6 313 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 MBD3L3A6NE82 208 aaPredicted RBP6.05□□□□□ -1.44
CRNDE-202ENST00000502066 PPP1R12AO14974 1030 aaPredicted RBP6.05□□□□□ -1.44
CRNDE-202ENST00000502066 HNRNPDLO14979 420 aaKnown RBP6.05□□□□□ -1.44
CRNDE-202ENST00000502066 SPTLC2O15270 562 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 HOXA3O43365 443 aaPredicted RBP6.05□□□□□ -1.44
CRNDE-202ENST00000502066 VEGFDO43915 354 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 ACSL4O60488 711 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 CCNT1O60563 726 aaKnown RBP6.05□□□□□ -1.44
CRNDE-202ENST00000502066 CCDC130P13994 396 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 AGXTP21549 392 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 SLC11A2P49281 568 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 LGALS3BPQ08380 585 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 LOXL1Q08397 574 aaPredicted RBP6.05□□□□□ -1.44
CRNDE-202ENST00000502066 SLC12A1Q13621 1099 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 TTC38Q5R3I4 469 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 GPRC6AQ5T6X5 926 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 KPRPQ5T749 579 aaPredicted RBP6.05□□□□□ -1.44
CRNDE-202ENST00000502066 IRGCQ6NXR0 463 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 CWC27Q6UX04 472 aaKnown RBP6.05□□□□□ -1.44
CRNDE-202ENST00000502066 DNM1P46Q6ZS02 220 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 CCDC186Q7Z3E2 898 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 ZNF354CQ86Y25 554 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 MBD3L2Q8NHZ7 208 aaPredicted RBP6.05□□□□□ -1.44
CRNDE-202ENST00000502066 CCDC110Q8TBZ0 833 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 BRIX1Q8TDN6 353 aaKnown RBP6.05□□□□□ -1.44
CRNDE-202ENST00000502066 PSMF1Q92530 271 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 ZNF501Q96CX3 271 aaPredicted RBP6.05□□□□□ -1.44
CRNDE-202ENST00000502066 C16orf92Q96LL3 132 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 RHNO1Q9BSD3 238 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 HES7Q9BYE0 225 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.05□□□□□ -1.44
CRNDE-202ENST00000502066 VPS54Q9P1Q0 977 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 ITGA11Q9UKX5 1188 aa6.05□□□□□ -1.44
CRNDE-202ENST00000502066 A0A0A6YYK5 440 aaPredicted RBP6.04□□□□□ -1.44
CRNDE-202ENST00000502066 FAM234BA2RU67 622 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 ASPDHA6ND91 283 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 CDC7O00311 574 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 AREL1O15033 823 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 SMAD6O43541 496 aaKnown RBP6.04□□□□□ -1.44
CRNDE-202ENST00000502066 FRS3O43559 492 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 CDC40O60508 579 aaKnown RBP eCLIP6.04□□□□□ -1.44
CRNDE-202ENST00000502066 CNOT3O75175 753 aaKnown RBP6.04□□□□□ -1.44
CRNDE-202ENST00000502066 NCR1O76036 304 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 UBXN7O94888 489 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 JCHAINP01591 159 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 HKR1P10072 659 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 RRM1P23921 792 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 PLK1P53350 603 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 TUBB4BP68371 445 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 SRSF4Q08170 494 aaKnown RBP6.04□□□□□ -1.44
CRNDE-202ENST00000502066 ABRQ12979 859 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 TUBB2AQ13885 445 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 MESDQ14696 234 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 TUBB8Q3ZCM7 444 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 HIBCHQ6NVY1 386 aaPredicted RBP6.04□□□□□ -1.44
CRNDE-202ENST00000502066 KIRREL2Q6UWL6 708 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 BHLHA9Q7RTU4 235 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 BRAPQ7Z569 592 aa6.04□□□□□ -1.44
CRNDE-202ENST00000502066 TRMT2AQ8IZ69 625 aaKnown RBP6.04□□□□□ -1.44
CRNDE-202ENST00000502066 LILRA3Q8N6C8 439 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms