RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 ARSGQ96EG1 525 aa2.39□□□□□ -2.03
TRBVA-201ENST00000498804 C10orf90Q96M02 699 aa2.39□□□□□ -2.03
TRBVA-201ENST00000498804 TREX2Q9BQ50 279 aaPredicted RBP2.39□□□□□ -2.03
TRBVA-201ENST00000498804 SDF4Q9BRK5 362 aa2.39□□□□□ -2.03
TRBVA-201ENST00000498804 LRRC61Q9BV99 259 aa2.39□□□□□ -2.03
TRBVA-201ENST00000498804 MAK16Q9BXY0 300 aaKnown RBP2.39□□□□□ -2.03
TRBVA-201ENST00000498804 UPF3AQ9H1J1 476 aaKnown RBP2.39□□□□□ -2.03
TRBVA-201ENST00000498804 MYNNQ9NPC7 610 aa2.39□□□□□ -2.03
TRBVA-201ENST00000498804 EQTNQ9NQ60 294 aa2.39□□□□□ -2.03
TRBVA-201ENST00000498804 FGF21Q9NSA1 209 aa2.39□□□□□ -2.03
TRBVA-201ENST00000498804 MAN2C1Q9NTJ4 1040 aa2.39□□□□□ -2.03
TRBVA-201ENST00000498804 PRMT7Q9NVM4 692 aaPredicted RBP2.39□□□□□ -2.03
TRBVA-201ENST00000498804 FAM120CQ9NX05 1096 aaKnown RBP2.39□□□□□ -2.03
TRBVA-201ENST00000498804 VPS28Q9UK41 221 aa2.39□□□□□ -2.03
TRBVA-201ENST00000498804 TMED3Q9Y3Q3 217 aa2.39□□□□□ -2.03
TRBVA-201ENST00000498804 LAS1LQ9Y4W2 734 aaKnown RBP2.39□□□□□ -2.03
TRBVA-201ENST00000498804 RSF1Q96T23 1441 aaPredicted RBP2.39□□□□□ -2.03
TRBVA-201ENST00000498804 ITIH6Q6UXX5 1313 aa2.39□□□□□ -2.03
TRBVA-201ENST00000498804 ANKRD61A6NGH8 418 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 ENO4A6NNW6 628 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 A8MV72 311 aaPredicted RBP2.38□□□□□ -2.03
TRBVA-201ENST00000498804 CCL24O00175 119 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 ADAM20O43506 726 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 SPRY1O43609 319 aaPredicted RBP2.38□□□□□ -2.03
TRBVA-201ENST00000498804 DANCRP0C864 163 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 HAPLN1P10915 354 aaPredicted RBP2.38□□□□□ -2.03
TRBVA-201ENST00000498804 ACTN2P35609 894 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 CYCSP99999 105 aaKnown RBP2.38□□□□□ -2.03
TRBVA-201ENST00000498804 FASTKD3Q14CZ7 662 aaKnown RBP2.38□□□□□ -2.03
TRBVA-201ENST00000498804 NECTIN1Q15223 517 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 EXT1Q16394 746 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 UGT3A2Q3SY77 523 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 LYSMD4Q5XG99 296 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 ZNF774Q6NX45 483 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 PAQR6Q6TCH4 344 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 GPRIN3Q6ZVF9 776 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 ARHGAP22Q7Z5H3 698 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 HOGA1Q86XE5 327 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 CATSPERDQ86XM0 798 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 LMNTD2Q8IXW0 634 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 MMD2Q8IY49 270 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 CDK20Q8IZL9 346 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.38□□□□□ -2.03
TRBVA-201ENST00000498804 C1orf131Q8NDD1 294 aaKnown RBP2.38□□□□□ -2.03
TRBVA-201ENST00000498804 PRSS33Q8NF86 280 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 OR1L3Q8NH93 324 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 VANGL1Q8TAA9 524 aaPredicted RBP2.38□□□□□ -2.03
TRBVA-201ENST00000498804 CCDC107Q8WV48 283 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 SSMEM1Q8WWF3 244 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 GTF3AQ92664 365 aaKnown RBP2.38□□□□□ -2.03
TRBVA-201ENST00000498804 SLCO2A1Q92959 643 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 DHX58Q96C10 678 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 TMCO6Q96DC7 493 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 FAM218AQ96MZ4 157 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 MS4A10Q96PG2 267 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 MXD3Q9BW11 206 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 DGCR6LQ9BY27 220 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 CPVLQ9H3G5 476 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 TBC1D22BQ9NU19 505 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.38□□□□□ -2.03
TRBVA-201ENST00000498804 PRR34Q9NV39 138 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 RNF150Q9ULK6 438 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 STUB1Q9UNE7 303 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 GPR34Q9UPC5 381 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 TNNQ9UQP3 1299 aa2.38□□□□□ -2.03
TRBVA-201ENST00000498804 A0A1W2PPK0 400 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 C15orf61A6NNL5 157 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 SRRM5B3KS81 715 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 SOCS3O14543 225 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 MEIS2O14770 477 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 MAGEC1O60732 1142 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 GFPT2O94808 682 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 SEC24AO95486 1093 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 CAPN2P17655 700 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 CDH3P22223 829 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 LBX1P52954 281 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 PAX9P55771 341 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 COX10Q12887 443 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 TNIP1Q15025 636 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 IL17RELQ6ZVW7 336 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 NUP54Q7Z3B4 507 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 MINDY1Q8N5J2 469 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 KLHDC1Q8N7A1 406 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 AQP11Q8NBQ7 271 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 CFAP61Q8NHU2 1237 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 ZNF519Q8TB69 540 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 RASL10AQ92737 203 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 NXNL1Q96CM4 212 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 NECTIN4Q96NY8 510 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 URM1Q9BTM9 101 aaKnown RBP2.37□□□□□ -2.03
TRBVA-201ENST00000498804 TRIM6Q9C030 488 aaPredicted RBP2.37□□□□□ -2.03
TRBVA-201ENST00000498804 MMP27Q9H306 513 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 PPANQ9NQ55 473 aaKnown RBP2.37□□□□□ -2.03
TRBVA-201ENST00000498804 SPHK2Q9NRA0 654 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 FAM207AQ9NSI2 230 aaPredicted RBP2.37□□□□□ -2.03
TRBVA-201ENST00000498804 OR6C2Q9NZP2 312 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 PPP1R3CQ9UQK1 317 aa2.37□□□□□ -2.03
TRBVA-201ENST00000498804 IGHV3OR16-10A0A075B7F0 116 aa2.36□□□□□ -2.03
TRBVA-201ENST00000498804 A0A1W2PPR1 153 aa2.36□□□□□ -2.03
TRBVA-201ENST00000498804 PI4K2BG5E9Z4 385 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms