RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 C5AR2Q9P296 337 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 NDOR1Q9UHB4 597 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 GPN3Q9UHW5 284 aaPredicted RBP17.81■□□□□ 0.44
PRKCB-209ENST00000498058 TCAF1Q9Y4C2 921 aa17.81■□□□□ 0.44
PRKCB-209ENST00000498058 ALOX12BO75342 701 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 IFNB1P01574 187 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 ZSCAN5DPP0CG00 497 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 MCM3P25205 808 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 GRIA3P42263 894 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 RAB28P51157 221 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 PLOD1Q02809 727 aaPredicted RBP17.8■□□□□ 0.44
PRKCB-209ENST00000498058 CCNG2Q16589 344 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 KCTD19Q17RG1 926 aaPredicted RBP17.8■□□□□ 0.44
PRKCB-209ENST00000498058 DNAJC21Q5F1R6 531 aaKnown RBP17.8■□□□□ 0.44
PRKCB-209ENST00000498058 LYPLAL1Q5VWZ2 237 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 PPP1R21Q6ZMI0 780 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 COX15Q7KZN9 410 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 MCATQ8IVS2 390 aaKnown RBP17.8■□□□□ 0.44
PRKCB-209ENST00000498058 CISD2Q8N5K1 135 aaKnown RBP17.8■□□□□ 0.44
PRKCB-209ENST00000498058 OR6P1Q8NGX9 317 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 PTERQ96BW5 349 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 CARD6Q9BX69 1037 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 MAP10Q9P2G4 905 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 SRPK3Q9UPE1 567 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 NTNG1Q9Y2I2 539 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 CSAG2Q9Y5P2 127 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 MRFAP1Q9Y605 127 aa17.8■□□□□ 0.44
PRKCB-209ENST00000498058 A1L4Q6 167 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 ERI2A8K979 691 aaKnown RBP17.79■□□□□ 0.44
PRKCB-209ENST00000498058 CCDC188H7C350 402 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 PRICKLE3O43900 615 aaPredicted RBP17.79■□□□□ 0.44
PRKCB-209ENST00000498058 CD9P21926 228 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 AOAHP28039 575 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 STIP1P31948 543 aaKnown RBP17.79■□□□□ 0.44
PRKCB-209ENST00000498058 FDFT1P37268 417 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 SOX8P57073 446 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 SNX1Q13596 522 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 NR6A1Q15406 480 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 CCSMST1Q4G0I0 132 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 DRICH1Q6PGQ1 229 aaPredicted RBP17.79■□□□□ 0.44
PRKCB-209ENST00000498058 IGFL3Q6UXB1 125 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 PRR7Q8TB68 274 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 FER1L6-AS2Q96M78 137 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 RUNDC3BQ96NL0 473 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 IP6K3Q96PC2 410 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 C17orf62Q9BQA9 187 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 MESP1Q9BRJ9 268 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 NDC1Q9BTX1 674 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 CHRAC1Q9NRG0 131 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 RAB6BQ9NRW1 208 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 TXLNGQ9NUQ3 528 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 IRAK4Q9NWZ3 460 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 G3BP2Q9UN86 482 aaKnown RBP17.79■□□□□ 0.44
PRKCB-209ENST00000498058 UNC79Q9P2D8 2635 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 CACNA1DQ01668 2161 aa17.79■□□□□ 0.44
PRKCB-209ENST00000498058 NRP2O60462 931 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 SLCO2B1O94956 709 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 MED26O95402 600 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 CBX6O95503 412 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 ONECUT2O95948 504 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 ALAS2P22557 587 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 CRADDP78560 199 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 SIX1Q15475 284 aaPredicted RBP17.78■□□□□ 0.44
PRKCB-209ENST00000498058 FASTKD1Q53R41 847 aaKnown RBP17.78■□□□□ 0.44
PRKCB-209ENST00000498058 FIGLAQ6QHK4 219 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 TTLL10Q6ZVT0 673 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 OR2L8Q8NGY9 312 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 MAGOHBQ96A72 148 aaKnown RBP17.78■□□□□ 0.44
PRKCB-209ENST00000498058 P2RY12Q9H244 342 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 SLC6A20Q9NP91 592 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 ERRFI1Q9UJM3 462 aaPredicted RBP17.78■□□□□ 0.44
PRKCB-209ENST00000498058 ZNF148Q9UQR1 794 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 RUVBL2Q9Y230 463 aaKnown RBP17.78■□□□□ 0.44
PRKCB-209ENST00000498058 B3GNT3Q9Y2A9 372 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 NFS1Q9Y697 457 aa17.78■□□□□ 0.44
PRKCB-209ENST00000498058 PEX12O00623 359 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 SOCS6O14544 535 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 CTSVO60911 334 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 PHF2O75151 1096 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 PSMB5P28074 263 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 RPL22P35268 128 aaKnown RBP17.77■□□□□ 0.44
PRKCB-209ENST00000498058 FNTAP49354 379 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 PRAMEP78395 509 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 NKG7Q16617 165 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 CYP1B1Q16678 543 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 OVCH1Q7RTY7 1134 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 CUZD1Q86UP6 607 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 DCUN1D3Q8IWE4 304 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 CEP112Q8N8E3 955 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 PRELID2Q8N945 189 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 CLEC1AQ8NC01 280 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 GRK7Q8WTQ7 553 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 ASZ1Q8WWH4 475 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 ZNF285Q96NJ3 590 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 SPSB2Q99619 263 aa17.77■□□□□ 0.44
PRKCB-209ENST00000498058 CUEDC1Q9NWM3 386 aaPredicted RBP17.77■□□□□ 0.44
PRKCB-209ENST00000498058 DRG1Q9Y295 367 aaKnown RBP17.77■□□□□ 0.44
PRKCB-209ENST00000498058 CNTRLQ7Z7A1 2325 aa17.77■□□□□ 0.43
PRKCB-209ENST00000498058 NOTCH2Q04721 2471 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 A0A1B0GX78 115 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms