RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 OR5K3A6NET4 321 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 C2orf74A8MZ97 194 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 ISM1B1AKI9 464 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 BTN3A3O00478 584 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 CASC3O15234 703 aaKnown RBP13.13□□□□□ -0.31
CPNE1-227ENST00000498056 TM9SF1O15321 606 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 WDR47O94967 919 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 ZWINTO95229 277 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 SBK3P0C264 359 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 ERGP11308 486 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 MTHFD2P13995 350 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 PNLIPP16233 465 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 CSF2RBP32927 897 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 HSD17B2P37059 387 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 HNMTP50135 292 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 PPP1CAP62136 330 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 GPLD1P80108 840 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 NAE1Q13564 534 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 ARHGAP19Q14CB8 494 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 SETDB1Q15047 1291 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 PRAMEF13Q5VWM6 474 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 SULT1C3Q6IMI6 304 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 IRGCQ6NXR0 463 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 KLHL35Q6PF15 583 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 ZYG11AQ6WRX3 759 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 RAB44Q7Z6P3 723 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-227ENST00000498056 LINC01555Q8NAE3 123 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 RDH11Q8TC12 318 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 SMPDL3AQ92484 453 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 NCSTNQ92542 709 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 PYCR2Q96C36 320 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 TGM7Q96PF1 710 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 PAIP2Q9BPZ3 127 aaKnown RBP13.13□□□□□ -0.31
CPNE1-227ENST00000498056 ACAT2Q9BWD1 397 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 EPB41L1Q9H4G0 881 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 CNOT10Q9H9A5 744 aaKnown RBP13.13□□□□□ -0.31
CPNE1-227ENST00000498056 MED4Q9NPJ6 270 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 NKIRAS1Q9NYS0 192 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 ACTR10Q9NZ32 417 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 OR6C2Q9NZP2 312 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 KLHL3Q9UH77 587 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 TAC3Q9UHF0 121 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 TMCO1Q9UM00 188 aa13.13□□□□□ -0.31
CPNE1-227ENST00000498056 PTPRZ1P23471 2315 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-227ENST00000498056 H3BQF6 201 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 CCNT2O60583 730 aaKnown RBP13.12□□□□□ -0.31
CPNE1-227ENST00000498056 IPO13O94829 963 aaKnown RBP13.12□□□□□ -0.31
CPNE1-227ENST00000498056 GP1BAP07359 652 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 CPA3P15088 417 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 UGT2B7P16662 529 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 ATP5F1P24539 256 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-227ENST00000498056 EEF1DP29692 281 aaKnown RBP13.12□□□□□ -0.31
CPNE1-227ENST00000498056 PEBP1P30086 187 aaKnown RBP13.12□□□□□ -0.31
CPNE1-227ENST00000498056 AGTR2P50052 363 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 NOVA1P51513 510 aaKnown RBP13.12□□□□□ -0.31
CPNE1-227ENST00000498056 ALDH18A1P54886 795 aaKnown RBP13.12□□□□□ -0.31
CPNE1-227ENST00000498056 GFERP55789 205 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 CCL7P80098 99 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 SPIDRQ14159 915 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 PCLAFQ15004 111 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 TRIP6Q15654 476 aaKnown RBP13.12□□□□□ -0.31
CPNE1-227ENST00000498056 CYP2A13Q16696 494 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 PTCHD3Q3KNS1 767 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 HHATQ5VTY9 493 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 CAPN13Q6MZZ7 669 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-227ENST00000498056 TRIM73Q86UV7 250 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 ADGRF3Q8IZF5 1079 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 SNX31Q8N9S9 440 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 UBTD2Q8WUN7 234 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 ESAMQ96AP7 390 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 TMEM237Q96Q45 408 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 GFM1Q96RP9 751 aaKnown RBP13.12□□□□□ -0.31
CPNE1-227ENST00000498056 MIPEPQ99797 713 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 MECRQ9BV79 373 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 ABCG4Q9H172 646 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 HRASLS2Q9NWW9 162 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 SPHK1Q9NYA1 384 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 OGFRQ9NZT2 677 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 COPG2Q9UBF2 871 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 OPTCQ9UBM4 332 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 ATXN7L1Q9ULK2 861 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-227ENST00000498056 ASB1Q9Y576 335 aa13.12□□□□□ -0.31
CPNE1-227ENST00000498056 SPAARA0A1B0GVQ0 90 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 LRRC14BA6NHZ5 514 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 TARM1B6A8C7 271 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 E7ENX8 843 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 G3V2L1 256 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 SLC30A4O14863 429 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 CAPN5O15484 640 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-227ENST00000498056 B4GAT1O43505 415 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 DLX3O60479 287 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 SIX3O95343 332 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-227ENST00000498056 NR1D1P20393 614 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 CCND1P24385 295 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 OAS2P29728 719 aaKnown RBP13.11□□□□□ -0.31
CPNE1-227ENST00000498056 PLA2G5P39877 138 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 GDF5P43026 501 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 SLC6A12P48065 614 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 PPP2R2AP63151 447 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 NFKB2Q00653 900 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms