RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 GOLGA7Q7Z5G4 137 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 NRROSQ86YC3 692 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 HOMEZQ8IX15 550 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 AFAP1L2Q8N4X5 818 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 OR56A3Q8NH54 315 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 RFWD2Q8NHY2 731 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 TRPC4APQ8TEL6 797 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 ESAMQ96AP7 390 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 INSM2Q96T92 566 aaPredicted RBP13.77□□□□□ -0.21
VPS26A-209ENST00000497564 TMEM168Q9H0V1 697 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 TRIT1Q9H3H1 467 aaKnown RBP13.77□□□□□ -0.21
VPS26A-209ENST00000497564 MVB12BQ9H7P6 319 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 EPG5Q9HCE0 2579 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 SPATA7Q9P0W8 599 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 WDR37Q9Y2I8 494 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 HEBP2Q9Y5Z4 205 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 SPAARA0A1B0GVQ0 90 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 OR7A17O14581 309 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 VILLO15195 856 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 HDAC3O15379 428 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 SH3BP5O60239 455 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 KATNA1O75449 491 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 ESRRBO95718 433 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 SLC16A8O95907 504 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 KITP10721 976 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 NME1P15531 152 aaKnown RBP13.76□□□□□ -0.21
VPS26A-209ENST00000497564 EPB42P16452 691 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 CSRP1P21291 193 aaKnown RBP13.76□□□□□ -0.21
VPS26A-209ENST00000497564 RPL10P27635 214 aaKnown RBP13.76□□□□□ -0.21
VPS26A-209ENST00000497564 HSD17B2P37059 387 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 HALP42357 657 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 CTSKP43235 329 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 SH3BP2P78314 561 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 PCDH1Q08174 1060 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 ILF3Q12906 894 aaKnown RBP eCLIP13.76□□□□□ -0.21
VPS26A-209ENST00000497564 ARHGAP19Q14CB8 494 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 CLCA4Q14CN2 919 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 PTCHD3Q3KNS1 767 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 SH2D4BQ5SQS7 431 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 LRRC56Q8IYG6 542 aaPredicted RBP13.76□□□□□ -0.21
VPS26A-209ENST00000497564 PHACTR4Q8IZ21 702 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 TEX9Q8N6V9 391 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 PHC3Q8NDX5 983 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 OR5AR1Q8NGP9 310 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 C12orf66Q96MD2 445 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 NTMT1Q9BV86 223 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 GSDMCQ9BYG8 508 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 CAAP1Q9H8G2 361 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 MID1IP1Q9NPA3 183 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 SEMA4BQ9NPR2 832 aaPredicted RBP13.76□□□□□ -0.21
VPS26A-209ENST00000497564 DNAJC28Q9NX36 388 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 MARCOQ9UEW3 520 aaPredicted RBP13.76□□□□□ -0.21
VPS26A-209ENST00000497564 POLG2Q9UHN1 485 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 KLF15Q9UIH9 416 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 TRAF6Q9Y4K3 522 aa13.76□□□□□ -0.21
VPS26A-209ENST00000497564 PDZK1P1A8MUH7 402 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 PPP6CO00743 305 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 AZIN1O14977 448 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 CCNT2O60583 730 aaKnown RBP13.75□□□□□ -0.21
VPS26A-209ENST00000497564 OTCP00480 354 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 CSF2P04141 144 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 MTHFD1P11586 935 aaKnown RBP13.75□□□□□ -0.21
VPS26A-209ENST00000497564 F3P13726 295 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 AK4P27144 223 aaPredicted RBP13.75□□□□□ -0.21
VPS26A-209ENST00000497564 NDUFS1P28331 727 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 ACTR1BP42025 376 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 GDF5P43026 501 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 ARFIP2P53365 341 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 AQP5P55064 265 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 INHBCP55103 352 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 NXPH1P58417 271 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 ACTR1AP61163 376 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 CDC16Q13042 620 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 TRAF3Q13114 568 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 RPE65Q16518 533 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 RBBP7Q16576 425 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 KANK2Q63ZY3 851 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 GPRIN3Q6ZVF9 776 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 MAVSQ7Z434 540 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 SPATS2Q86XZ4 545 aaKnown RBP13.75□□□□□ -0.21
VPS26A-209ENST00000497564 CLYBLQ8N0X4 340 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 ZNF480Q8WV37 535 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 THOC1Q96FV9 657 aaKnown RBP13.75□□□□□ -0.21
VPS26A-209ENST00000497564 MAGEB10Q96LZ2 347 aaPredicted RBP13.75□□□□□ -0.21
VPS26A-209ENST00000497564 MENTQ9BUN1 341 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 SGPP1Q9BX95 441 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 TMEM120AQ9BXJ8 343 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 NOL11Q9H8H0 719 aaKnown RBP13.75□□□□□ -0.21
VPS26A-209ENST00000497564 IPPKQ9H8X2 491 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 TNFRSF12AQ9NP84 129 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 PRDM8Q9NQV8 689 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 DNAJC11Q9NVH1 559 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 TBC1D29Q9UFV1 150 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 DCTN4Q9UJW0 460 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 ZNF225Q9UK10 706 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 BTBD3Q9Y2F9 522 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 ANGPTL3Q9Y5C1 460 aa13.75□□□□□ -0.21
VPS26A-209ENST00000497564 FREM2Q5SZK8 3169 aa13.74□□□□□ -0.21
VPS26A-209ENST00000497564 A0A0G2JND7 137 aa13.74□□□□□ -0.21
VPS26A-209ENST00000497564 KRT87PA6NCN2 255 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms