RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 A6NL46 340 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 TTLL8A6PVC2 850 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 E5RI56 91 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 PEX12O00623 359 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 SRPX2O60687 465 aaPredicted RBP12.24□□□□□ -0.45
PTPRF-214ENST00000496043 CEACAM4O75871 244 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 ATXN8OSP0DMR3 200 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 PKMP14618 531 aaKnown RBP12.24□□□□□ -0.45
PTPRF-214ENST00000496043 ATP5DP30049 168 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 OTX2P32243 289 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 FOLR3P41439 243 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 ATP1A4Q13733 1029 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 THOC5Q13769 683 aaKnown RBP12.24□□□□□ -0.45
PTPRF-214ENST00000496043 DHX34Q14147 1143 aaKnown RBP12.24□□□□□ -0.45
PTPRF-214ENST00000496043 CYP1B1Q16678 543 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 FAM214AQ32MH5 1076 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 ANKRD20A4Q4UJ75 823 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 TCTE1Q5JU00 501 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 YOD1Q5VVQ6 348 aaPredicted RBP12.24□□□□□ -0.45
PTPRF-214ENST00000496043 ANKRD22Q5VYY1 191 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 PAPD7Q5XG87 772 aaKnown RBP12.24□□□□□ -0.45
PTPRF-214ENST00000496043 FCRL6Q6DN72 434 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 CNSTQ6PJW8 725 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 CCDC137Q6PK04 289 aaKnown RBP12.24□□□□□ -0.45
PTPRF-214ENST00000496043 TTLL10Q6ZVT0 673 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 HPS6Q86YV9 775 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 CILP2Q8IUL8 1156 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 HMGCLL1Q8TB92 370 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 FER1L6-AS2Q96M78 137 aa12.24□□□□□ -0.45
PTPRF-214ENST00000496043 INTS10Q9NVR2 710 aaKnown RBP12.24□□□□□ -0.45
PTPRF-214ENST00000496043 CTAGE9A4FU28 777 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 GOLGA8MH3BSY2 632 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 ZSCAN12O43309 604 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 KLHL41O60662 606 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 DPM1O60762 260 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 NIPSNAP2O75323 286 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 MATN4O95460 622 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 BDKRB1P46663 353 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 MLLT10P55197 1068 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 GBX1Q14549 363 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 GRM7Q14831 915 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 CYP2A13Q16696 494 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 CCSMST1Q4G0I0 132 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 MRPL14Q6P1L8 145 aaKnown RBP12.23□□□□□ -0.45
PTPRF-214ENST00000496043 CENPUQ71F23 418 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 OVCH1Q7RTY7 1134 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 ATCAYQ86WG3 371 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 REXO1L1PQ8IX06 675 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 TTC29Q8NA56 475 aaPredicted RBP12.23□□□□□ -0.45
PTPRF-214ENST00000496043 FDCSPQ8NFU4 85 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 OR9A1PQ8NGU1 263 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 OR2Y1Q8NGV0 311 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 ACTRT1Q8TDG2 376 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 GRK7Q8WTQ7 553 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 MIB2Q96AX9 1013 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 MIPEPQ99797 713 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 IL1RAPL1Q9NZN1 696 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 SPATA7Q9P0W8 599 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 GALPQ9UBC7 116 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 RUVBL2Q9Y230 463 aaKnown RBP12.23□□□□□ -0.45
PTPRF-214ENST00000496043 PLAAQ9Y263 795 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 NEU2Q9Y3R4 380 aa12.23□□□□□ -0.45
PTPRF-214ENST00000496043 BOD1L1Q8NFC6 3051 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 FLNBO75369 2602 aaKnown RBP12.22□□□□□ -0.45
PTPRF-214ENST00000496043 A0A1B0GX78 115 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 PGRMC1O00264 195 aaKnown RBP12.22□□□□□ -0.45
PTPRF-214ENST00000496043 DSCR3O14972 297 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 USP1O94782 785 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 ONECUT2O95948 504 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 ALBP02768 609 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 CMPK1P30085 196 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 HSD17B2P37059 387 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 GCGRP47871 477 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 SLC9A5Q14940 896 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 NAA25Q14CX7 972 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 KLHL38Q2WGJ6 581 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 ACSBG2Q5FVE4 666 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 WASHC2DQ5SRD0 308 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 LMNTD2Q8IXW0 634 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 EFCAB3Q8N7B9 438 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 CLEC1AQ8NC01 280 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 OR2A1Q8NGT9 310 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 CALML6Q8TD86 181 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 SMPDL3AQ92484 453 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 NACC2Q96BF6 587 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 ZNF669Q96BR6 464 aaPredicted RBP12.22□□□□□ -0.45
PTPRF-214ENST00000496043 FAM136AQ96C01 138 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 SERPINB12Q96P63 405 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 OSBPL9Q96SU4 736 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 SELENOSQ9BQE4 189 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 CCDC68Q9H2F9 335 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 ENAMQ9NRM1 1142 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 FAM114A2Q9NRY5 505 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 CUTCQ9NTM9 273 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 GPR83Q9NYM4 423 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 C5AR2Q9P296 337 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 KLHL42Q9P2K6 505 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 TSR3Q9UJK0 312 aaKnown RBP12.22□□□□□ -0.45
PTPRF-214ENST00000496043 KLK4Q9Y5K2 254 aa12.22□□□□□ -0.45
PTPRF-214ENST00000496043 MAD1L1Q9Y6D9 718 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms